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Pull requests: MRtrix3/mrtrix3

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Pull requests list

Add support for 5ttgen deep_atropos to enable 5TT image generation with ANTsPyNet Atropos segmentation
#3053 opened Dec 17, 2024 by LucSam Loading…
Print build information at the end of configuration build
#3052 opened Dec 16, 2024 by daljit46 Loading…
@daljit46
2
tcksift2: Minor fixes to diagnosis data bug
#3050 opened Dec 11, 2024 by Lestropie Loading…
@Lestropie
voxel2mesh fixes bug
#3049 opened Dec 2, 2024 by Lestropie Loading… 3.0.5 updates
@Lestropie
1
DICOM: ignore image positioning tags if nested within Philips private sequence bug DICOM
#3047 opened Nov 26, 2024 by jdtournier Loading… 3.0.5 updates
@jdtournier
2
FSL FIRST pre-calculated inputs enhancement scripts
#3045 opened Nov 24, 2024 by Lestropie • Draft
5 tasks
3.1.0 updates
@Lestropie
2
dwi2adc: Change IVIM interface
#3044 opened Nov 24, 2024 by Lestropie Loading… 3.1.0 updates
@Lestropie
11
labelconvert LUTs for Schaefer parcellations
#3043 opened Nov 24, 2024 by Lestropie Loading…
@Lestropie
Added info about consequences of using -white_stem in 5ttgen hsvs documentation
#3042 opened Nov 23, 2024 by Lestropie Loading… 3.0.5 updates
@Lestropie
New command: fixeltransform
#3033 opened Nov 6, 2024 by Lestropie • Draft
@Lestropie
8
App::get_options(): Assert correct usage
#3032 opened Nov 6, 2024 by Lestropie Loading…
@Lestropie
1
dwidenoise: Enhancements enhancement
#3029 opened Nov 4, 2024 by Lestropie • Draft
@Lestropie
163
tcksample: Ability to sample SH amplitudes enhancement
#3028 opened Oct 24, 2024 by Lestropie • Draft
2 tasks
@Lestropie
2
Tolerance for dw_scheme differences on header merge bug
#3027 opened Oct 22, 2024 by Lestropie Loading… 3.0.5 updates
1
@Lestropie
WIP: use std::filesystem for handling of file paths
#3026 opened Oct 16, 2024 by daljit46 • Draft
@daljit46
5TTgen MSMT enhancement scripts
#3025 opened Oct 10, 2024 by arkiev Loading…
28
population_template: Fix multi-contrast registration bug scripts
#3018 opened Oct 4, 2024 by Lestropie Loading… 3.1.0 updates
@Lestropie
1
dir* command modifications for fixed direction handling enhancement
#3013 opened Sep 26, 2024 by Lestropie Loading…
@Lestropie
DWI metadata fixes for master bug
#3011 opened Sep 20, 2024 by Lestropie Loading… 3.0.5 updates
2
@Lestropie
2
Merge SHARDRecon into main MRtrix3 codebase
#2994 opened Sep 12, 2024 by dchristiaens Loading…
4 of 6 tasks
175
Rename sh2power to sh2metric, new "entropy" operation enhancement
#2985 opened Sep 3, 2024 by Lestropie • Draft
6 tasks
@Lestropie
27
Python: Remove one of three filesystem structures build Python API
#2971 opened Aug 20, 2024 by Lestropie Loading… 3.1.0 updates
@Lestropie
2
run.command(): Change to shebang handling Python API
#2970 opened Aug 19, 2024 by Lestropie • Draft 3.1.0 updates
@Lestropie
2
Python CLI changes for Windows image piping bug Python API Windows
#2969 opened Aug 17, 2024 by Lestropie • Draft 3.1.0 updates
@Lestropie
2
mrtrix3.path.wait_for(): Fix variable ghosting bug Python API
#2968 opened Aug 17, 2024 by Lestropie Loading… 3.0.5 updates
@Lestropie
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