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89 workflow run results
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disable call caching for various workflows Pytest Workflows #665: Pull request #251 opened by kapsakcj
November 17, 2023 20:54 14s cjk-disable-call-caching
cjk-disable-call-caching
November 17, 2023 20:54 14s
Resfinder improvements, added support for Shigella spp., added XDR Shigella prediction Pytest Workflows #664: Pull request #159 synchronize by kapsakcj
November 16, 2023 21:31 9m 57s cjk-pointfinder
cjk-pointfinder
November 16, 2023 21:31 9m 57s
TheiaCoV_ONT_PHB Influenza Track Pytest Workflows #663: Pull request #233 synchronize by jrotieno
November 15, 2023 17:01 2m 37s jro_theiacov_ont_flu_clean
jro_theiacov_ont_flu_clean
November 15, 2023 17:01 2m 37s
TheiaProk TB: new VCF output and modification to the coverage report Pytest Workflows #662: Pull request #245 synchronize by sage-wright
November 15, 2023 15:42 29m 18s smw-tb-2023-10-25-dev
smw-tb-2023-10-25-dev
November 15, 2023 15:42 29m 18s
Nextclade Output Added Pytest Workflows #661: Pull request #239 synchronize by HNHalstead
November 14, 2023 01:26 15m 5s DOH-HNH0303:nextclade_output_update
DOH-HNH0303:nextclade_output_update
November 14, 2023 01:26 15m 5s
TheiaProk TB: new VCF output and modification to the coverage report Pytest Workflows #660: Pull request #245 synchronize by sage-wright
November 13, 2023 20:39 14m 49s smw-tb-2023-10-25-dev
smw-tb-2023-10-25-dev
November 13, 2023 20:39 14m 49s
TheiaProk TB: new VCF output and modification to the coverage report Pytest Workflows #659: Pull request #245 synchronize by sage-wright
November 13, 2023 20:37 18m 6s smw-tb-2023-10-25-dev
smw-tb-2023-10-25-dev
November 13, 2023 20:37 18m 6s
TheiaProk TB: new VCF output and modification to the coverage report Pytest Workflows #658: Pull request #245 opened by sage-wright
November 13, 2023 20:30 9m 46s smw-tb-2023-10-25-dev
smw-tb-2023-10-25-dev
November 13, 2023 20:30 9m 46s
CZGenEpi_Prep_PHB: implementing user-requested changes Pytest Workflows #657: Pull request #244 opened by sage-wright
November 13, 2023 19:40 16s smw-czgenepi-dev
smw-czgenepi-dev
November 13, 2023 19:40 16s
[Kraken2] Add module to recalculate abundances based on fragment length - Kraken2_ont wf and TheiaCoV_ONT wf Pytest Workflows #656: Pull request #240 synchronize by cimendes
November 8, 2023 14:54 18m 34s im-kraken2-ont
im-kraken2-ont
November 8, 2023 14:54 18m 34s
[Kraken2] Add module to recalculate abundances based on fragment length - Kraken2_ont wf and TheiaCoV_ONT wf Pytest Workflows #655: Pull request #240 synchronize by cimendes
November 8, 2023 14:19 19m 8s im-kraken2-ont
im-kraken2-ont
November 8, 2023 14:19 19m 8s
[Kraken2] Add module to recalculate abundances based on fragment length - Kraken2_ont wf and TheiaCoV_ONT wf Pytest Workflows #654: Pull request #240 synchronize by cimendes
November 8, 2023 11:40 20m 51s im-kraken2-ont
im-kraken2-ont
November 8, 2023 11:40 20m 51s
[Kraken2] Add module to recalculate abundances based on fragment length - Kraken2_ont wf and TheiaCoV_ONT wf Pytest Workflows #653: Pull request #240 opened by cimendes
November 8, 2023 11:20 18m 0s im-kraken2-ont
im-kraken2-ont
November 8, 2023 11:20 18m 0s
Nextclade Output Added Pytest Workflows #652: Pull request #239 opened by DOH-HNH0303
November 7, 2023 23:57 17m 42s DOH-HNH0303:nextclade_output_update
DOH-HNH0303:nextclade_output_update
November 7, 2023 23:57 17m 42s
TheiaCoV_ONT_PHB Influenza Track Pytest Workflows #651: Pull request #233 synchronize by jrotieno
November 7, 2023 11:32 13m 4s jro_theiacov_ont_flu_clean
jro_theiacov_ont_flu_clean
November 7, 2023 11:32 13m 4s
update ncbi-scrub task (version 2.2.1) Pytest Workflows #650: Pull request #202 synchronize by cimendes
November 7, 2023 09:06 4m 23s im-ncbi-scrub-update
im-ncbi-scrub-update
November 7, 2023 09:06 4m 23s
update default amrfinderplus docker image to v3.11.20 and db 2023-09-… Pytest Workflows #649: Commit 5fc24ee pushed by frankambrosio3
November 3, 2023 13:30 15m 21s main
main
November 3, 2023 13:30 15m 21s
TheiaCoV_FASTA_Batch: TheiaCoV_FASTA, for many samples at once Pytest Workflows #648: Pull request #238 synchronize by cimendes
November 3, 2023 05:14 17s smw-theiacov-fasta-batch-dev
smw-theiacov-fasta-batch-dev
November 3, 2023 05:14 17s
TheiaCoV_FASTA_Batch: TheiaCoV_FASTA, for many samples at once Pytest Workflows #647: Pull request #238 opened by sage-wright
November 2, 2023 18:56 21s smw-theiacov-fasta-batch-dev
smw-theiacov-fasta-batch-dev
November 2, 2023 18:56 21s
Resfinder improvements, added support for Shigella spp., added XDR Shigella prediction Pytest Workflows #646: Pull request #159 synchronize by kapsakcj
November 2, 2023 15:10 17m 56s cjk-pointfinder
cjk-pointfinder
November 2, 2023 15:10 17m 56s
Resfinder improvements, added support for Shigella spp., added XDR Shigella prediction Pytest Workflows #645: Pull request #159 synchronize by kapsakcj
November 2, 2023 14:51 15m 22s cjk-pointfinder
cjk-pointfinder
November 2, 2023 14:51 15m 22s
Resfinder improvements, added support for Shigella spp., added XDR Shigella prediction Pytest Workflows #644: Pull request #159 synchronize by kapsakcj
November 1, 2023 17:40 17m 0s cjk-pointfinder
cjk-pointfinder
November 1, 2023 17:40 17m 0s
Resfinder improvements, added support for Shigella spp., added XDR Shigella prediction Pytest Workflows #643: Pull request #159 synchronize by kapsakcj
November 1, 2023 15:28 16m 43s cjk-pointfinder
cjk-pointfinder
November 1, 2023 15:28 16m 43s
Resfinder improvements, added support for Shigella spp., added XDR Shigella prediction Pytest Workflows #642: Pull request #159 synchronize by kapsakcj
November 1, 2023 14:26 14m 5s cjk-pointfinder
cjk-pointfinder
November 1, 2023 14:26 14m 5s
Mercury_Prep_N_Batch: print the excluded_samples.tsv and update Docker to avoid Google SDK warning Pytest Workflows #641: Pull request #220 synchronize by sage-wright
October 27, 2023 17:47 18s smw-cat-excluded-dev
smw-cat-excluded-dev
October 27, 2023 17:47 18s