CI: Transition from s4ext to json #2011
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For reference, the following script was used to convert from import json
import sys
from pathlib import Path
extensions_index_dir = Path("/home/jcfr/Projects/ExtensionsIndex")
updated_extensions_index_dir = extensions_index_dir
def parse_s4ext(ext_file_path):
"""Parse a Slicer extension description file.
:param ext_file_path: Path to a Slicer extension description file.
"""
ext_metadata = {}
with open(ext_file_path) as ext_file:
for line in ext_file:
if not line.strip() or line.startswith("#"):
continue
fields = [field.strip() for field in line.split(' ', 1)]
assert(len(fields) <= 2)
ext_metadata[fields[0]] = fields[1] if len(fields) == 2 else None
return ext_metadata
# Collect s4ext files
s4ext_filepaths = list(extensions_index_dir.glob("*.s4ext"))
print(f"Found {len(s4ext_filepaths)} extension files (.s4ext)")
# Parse s4ext files and generate corresponding json files
for index, filepath in enumerate(s4ext_filepaths):
metadata = parse_s4ext(filepath)
#print("filepath", filepath)
updated_metadata = {
"scmurl": metadata["scmurl"],
"scmrevision": metadata["scmrevision"],
"build_dependencies": [] if metadata.get("depends", "NA") == "NA" else metadata["depends"].split(" "),
"category": metadata["category"],
"build_subdirectory": metadata["build_subdirectory"],
}
with open(updated_extensions_index_dir / f"{filepath.stem}.json", 'w') as fileContents:
fileContents.write(json.dumps(updated_metadata, sort_keys=True, indent=2))
fileContents.write("\n")
print(f"Generated {index + 1} extension files (.json)")
from pprint import pprint as pp
print(f"\nMetadata of extension #{index + 1} ({filepath.stem}):\n")
pp(updated_metadata) |
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This was referenced Mar 19, 2024
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@lassoan This is ready for review |
jcfr
commented
Mar 19, 2024
lassoan
reviewed
Mar 20, 2024
This was referenced Apr 1, 2024
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A script like the following was used. Note that "pre-commit run -a" was
also executed to reformat the json files afterward.
```
import json
import sys
from pathlib import Path
extensions_index_dir = Path("/home/jcfr/Projects/ExtensionsIndex")
updated_extensions_index_dir = extensions_index_dir
def parse_s4ext(ext_file_path):
"""Parse a Slicer extension description file.
:param ext_file_path: Path to a Slicer extension description file.
"""
ext_metadata = {}
with open(ext_file_path) as ext_file:
for line in ext_file:
if not line.strip() or line.startswith("#"):
continue
fields = [field.strip() for field in line.split(' ', 1)]
assert(len(fields) <= 2)
ext_metadata[fields[0]] = fields[1] if len(fields) == 2 else None
return ext_metadata
s4ext_filepaths = list(extensions_index_dir.glob("*.s4ext"))
print(f"Found {len(s4ext_filepaths)} extension files (.s4ext)")
for index, filepath in enumerate(s4ext_filepaths):
metadata = parse_s4ext(filepath)
updated_metadata = {
"scm_url": metadata["scmurl"],
"scm_revision": metadata["scmrevision"],
"build_dependencies": [] if metadata.get("depends", "NA") == "NA" else metadata["depends"].split(" "),
"category": metadata["category"],
"build_subdirectory": metadata["build_subdirectory"],
}
with open(updated_extensions_index_dir / f"{filepath.stem}.json", 'w') as fileContents:
fileContents.write(json.dumps(updated_metadata, sort_keys=True, indent=2))
fileContents.write("\n")
print(f"Generated {index + 1} extension files (.json)")
from pprint import pprint as pp
print(f"\nMetadata of extension #{index + 1} ({filepath.stem}):\n")
pp(updated_metadata)
```
Update GitHub and CircleCI settings to check for json files. Update `check_description_files` CLI to parse json files: * Remove `parse_s4ext` and introduce `parse_json` function along with `ExtensionParseError` exception. * Update list of supported URL schemes. Only `https` and `git` are supported * Remove obsolete `check_scm_notlocal` check
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A script like the following was used. Note that "pre-commit run -a" was
also executed to reformat the json files afterward.
```
import json
import sys
from pathlib import Path
extensions_index_dir = Path("/home/jcfr/Projects/ExtensionsIndex")
json_filepaths = list(extensions_index_dir.glob("*.json"))
print(f"Found {len(json_filepaths)} extension files (.json)")
for index, filepath in enumerate(json_filepaths):
with open(filepath) as fileContents:
metadata = json.load(fileContents)
metadata["$schema"] = "https://raw.githubusercontent.com/Slicer/Slicer/main/Schemas/slicer-extension-catalog-entry-schema-v1.0.0.json#"
with open(extensions_index_dir / filepath, 'w') as fileContents:
fileContents.write(json.dumps(metadata, sort_keys=True, indent=2))
fileContents.write("\n")
```
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In response to discussions during the Slicer developer hangout on March 12th, we have decided to revamp the organization of extension metadata in the extensions index, transitioning from the s4ext format to json.
Motivation:
CMakeLists.txtfrom the ones organized in this repository and used to drive the build of extensions.Related issues:
Related pull requests:
Next steps:
cc: @lassoan @sjh26 @RafaelPalomar @mauigna06 @pieper
Footnotes
The
EXTENSION_CATEGORYvariable currently set in theCMakeLists.txtwill likely be deprecated ↩This is described on the Slice Discourse forum: https://discourse.slicer.org/t/introduction-of-tiers-for-slicer-extensions/34870 ↩