Skip to content

Issues: KarchinLab/open-cravat

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

29 Open 193 Closed
29 Open 193 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

Python 3.12+ has stricter escape character requirements
#319 opened Dec 18, 2024 by cvaske
1
RefSeq mapper
#312 opened Nov 29, 2024 by RP-Bioinfo
Misаnnotation of mitohondrial genes with Mitomap module
#305 opened Nov 18, 2024 by jukerbox
vcf report export is short of records compared to tsv and excel
#296 opened Sep 30, 2024 by clinicalngs
1
ACMG Plugin enhancement New feature or request
#277 opened Jul 4, 2024 by zuber-bioinfo
1
Support for PhyloP30 and Phastcons30
#275 opened Jun 27, 2024 by tkmamidi
1
Update genecode mapper
#269 opened Jun 12, 2024 by cheanney
1
IndexError: index out of range when annotating vcf file
#230 opened Mar 26, 2024 by MarvinDo
@kmoad
1
incorrect SO assignment - "exon_loss_variant" for intronic region
#227 opened Mar 21, 2024 by EugeneEA
1
rdata download option not working bug Something isn't working
#204 opened Dec 21, 2023 by samuelbharti
@kmoad @skanderson
1
pharmgkb OC and website differing annotations
#201 opened Dec 6, 2023 by iranmdl
@jasminebro @kmoad
@skanderson @mlarsen5
7
Why does OMIM module give less information than is in database?
#216 opened Nov 13, 2023 by jukerbox
@mlarsen5
2
Resume annotation option bug Something isn't working enhancement New feature or request
#193 opened Nov 3, 2023 by tkmamidi
@kmoad @skanderson
2
Update all button not working
#178 opened Aug 24, 2023 by RachelKarchin
@mlarsen5
1
multi-process parameter not working
#176 opened Aug 22, 2023 by tkmamidi
@kmoad
2
ALFA now has genotype frequency
#217 opened Aug 3, 2023 by cariaso
@skanderson
GWAS catalog: no output
#162 opened Jun 28, 2023 by jwehr618
@kmoad
2
possible incorrect handling of tRNA genes
#161 opened Jun 21, 2023 by EugeneEA
@kmoad
Not main selected by default
#160 opened Jun 21, 2023 by EugeneEA
@kmoad
SOURCE:error.mavedb
#218 opened Jun 1, 2023 by tkmamidi
@mlarsen5
1
Missing variants in the annotated VCF
#156 opened May 31, 2023 by skoul9
@kmoad
2
Transcript level annotation format
#219 opened May 9, 2023 by tkmamidi
@kmoad
1
failed to convert VCF from gridss output
#138 opened Feb 16, 2023 by lmanchon
@kmoad
6
Not main transcript selected by default?
#130 opened Dec 2, 2022 by EugeneEA
@mlarsen2
3
Oncokb deletion
#220 opened Apr 8, 2022 by jkobject
@skanderson
5
ProTip! What’s not been updated in a month: updated:<2024-11-26.