Require 8 cores for FragPipe jobs. #1258
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bgruening
reviewed
Jul 16, 2024
| @@ -1437,3 +1437,6 @@ tools: | |||
| scheduling: | |||
| require: | |||
| - singularity | |||
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| toolshed.g2.bx.psu.edu/repos/galaxyp/fragpipe/fragpipe/.*: | |||
| cores: 8 | |||
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Okay, I should increase the memory in the pull request too, then. Do you have an estimate for how long jobs requesting 8-cores, 256GB memory would take to queue?
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I don't know. You can try. But I would start with 56 or so!
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Okay, let's try that. Can always bump it up later. Pushed a new commit 👍.
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Thanks! |
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FragPipe requires further cores to run successfully.