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Make all imputation methods consistent in regard to encoding requirements
enhancement
New feature or request
#824
opened Nov 13, 2024 by
nicolassidoux
Make Survival Analysis Estimators consistent, and pass all required arguments
enhancement
New feature or request
#822
opened Nov 7, 2024 by
eroell
Master issue ehrapy operating on ehrdata
enhancement
New feature or request
#818
opened Nov 6, 2024 by
eroell
Validating encoded-ness state of AnnData object
enhancement
New feature or request
#815
opened Oct 31, 2024 by
eroell
Master issue: consistency and clarity about feature type, encoding, and the requirements of functions regarding these states
enhancement
New feature or request
#814
opened Oct 31, 2024 by
eroell
implement a "ts.filter_features()"
enhancement
New feature or request
#809
opened Oct 23, 2024 by
eroell
Draft good integration with pypots
enhancement
New feature or request
#806
opened Oct 9, 2024 by
eroell
Master issue repeated measurements
enhancement
New feature or request
#805
opened Oct 9, 2024 by
eroell
Investigate whether current KNN imputation default (FKNNI) works for all sparseness and AnnData objects
bug
Something isn't working
enhancement
New feature or request
#803
opened Oct 1, 2024 by
Zethson
2 tasks
Add tests for pass through calls of scanpy functions
ci
Continuous Integration
testing
Testing
#792
opened Aug 26, 2024 by
eroell
Check ehrapy compatibility with Python 3.12
enhancement
New feature or request
#786
opened Aug 13, 2024 by
Zethson
Maintenance: Something isn't working
ci
Continuous Integration
documentation
Improvements or additions to documentation
uv
causes readthedocs build to fail
bug
#766
opened Jun 25, 2024 by
eroell
1 of 4 tasks
figure settings not properly passed through
bug
Something isn't working
#760
opened Jun 24, 2024 by
Zethson
Correlation plot for variable dependencies
enhancement
New feature or request
#745
opened Jun 1, 2024 by
mhaist94
Multivariate and regularized CoxPH models
enhancement
New feature or request
#744
opened Jun 1, 2024 by
mhaist94
Visualization of CoxPH models
enhancement
New feature or request
#743
opened Jun 1, 2024 by
mhaist94
Enhancing KM plot data depth and functionality
enhancement
New feature or request
#742
opened Jun 1, 2024 by
mhaist94
knn_imputation with backend='faiss' can fail to impute values without raising a warning
triage
#734
opened May 28, 2024 by
eroell
Distinguish between ordinal and nominal categorical feature types
enhancement
New feature or request
#713
opened May 2, 2024 by
Lilly-May
Consider adding highly variable features to the QC method
enhancement
New feature or request
#693
opened Apr 14, 2024 by
Zethson
Support branching for cohort tracking
enhancement
New feature or request
#682
opened Apr 4, 2024 by
Zethson
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