Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

MRG: release sourmash rust core r0.16.0 #3356

Merged
merged 1 commit into from
Oct 15, 2024
Merged

MRG: release sourmash rust core r0.16.0 #3356

merged 1 commit into from
Oct 15, 2024

Conversation

ctb
Copy link
Contributor

@ctb ctb commented Oct 15, 2024

[0.16.0] - 2024-10-15

MSRV: 1.65

Changes/additions:

Updates:

Copy link

codecov bot commented Oct 15, 2024

Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 86.42%. Comparing base (4bae86b) to head (2a744fb).
Report is 1 commits behind head on latest.

Additional details and impacted files
@@           Coverage Diff           @@
##           latest    #3356   +/-   ##
=======================================
  Coverage   86.42%   86.42%           
=======================================
  Files         137      137           
  Lines       16070    16070           
  Branches     2211     2211           
=======================================
  Hits        13889    13889           
  Misses       1874     1874           
  Partials      307      307           
Flag Coverage Δ
hypothesis-py 25.47% <ø> (ø)
python 92.39% <ø> (ø)
rust 62.06% <ø> (ø)

Flags with carried forward coverage won't be shown. Click here to find out more.

☔ View full report in Codecov by Sentry.
📢 Have feedback on the report? Share it here.

@ctb ctb merged commit 29b7887 into latest Oct 15, 2024
44 checks passed
@ctb ctb deleted the release/r0.16.0 branch October 15, 2024 18:34
@ctb ctb mentioned this pull request Dec 5, 2024
ctb added a commit that referenced this pull request Dec 5, 2024
Developer updates:

* build: move ORCID to metadata in pyproject.toml, fix pixi (#3416)
* build: simplify Rust release (#3392)
* fix: Avoid re-calculating md5sum on clone and conversion to
KmerMinHashBTree (#3385)
* r0.15.1 release (#3304)
* update sourmash core to r0.17.0 (#3381)
* Added union method to HLL (#3293)
* Build: upgrade to newer maturin (#3366)
* CI: use supported ubuntu for codspeed (#3350)
* Fix clippy lints from 1.83 beta (#3357)
* Implement resumability for revindex (#3275)
* add `Manifest::intersect_manifest` to Rust core (#3305)
* bump sourmash core to r0.17.2 (#3399)
* change `sig_from_record` to use scaled from `Record` to downsample
(#3387)
* derive Hash for `HashFunctions` (#3344)
* enforce a single scaled on a `CollectionSet` (#3397)
* fix formatting from #3306 (#3307)
* have ruff ignore ipynb so as to avoid triggering an error during CI
(#3325)
* improve downsampling behavior on `KmerMinHash`; fix `RevIndex::gather`
bug around `scaled`. (#3342)
* panic when `FSStorage::load_sig` encounters more than one `Signature`
in a JSON record (#3333)
* propagate error from `RocksDB::open` on bad directory (#3306)
* refactor `calculate_gather_stats` to disallow repeated downsampling
(#3352)
* release core r0.17.1 (#3388)
* release sourmash rust core r0.16.0 (#3356)
* standardize on u32 for scaled, and introduce `ScaledType` (#3364)
* update plugin documentation for users (#3286)
* update sourmash core to r0.15.2 (#3338)
* when lingroups are provided, use them for `csv_summary` (#3311)
* Misc Rust updates to core (#3297)
* Resolve issue for high precision MLE estimation (#3296)

Dependabot and pre-commit CI updates:

* Bump DeterminateSystems/magic-nix-cache-action from 7 to 8 (#3319)
* Bump DeterminateSystems/nix-installer-action from 13 to 14 (#3320)
* Bump DeterminateSystems/nix-installer-action from 14 to 15 (#3374)
* Bump DeterminateSystems/nix-installer-action from 15 to 16 (#3401)
* Bump camino from 1.1.7 to 1.1.9 (#3301)
* Bump codspeed-criterion-compat from 2.6.0 to 2.7.2 (#3324)
* Bump conda-incubator/setup-miniconda from 3.0.4 to 3.1.0 (#3373)
* Bump csv from 1.3.0 to 1.3.1 (#3390)
* Bump getset from 0.1.2 to 0.1.3 (#3328)
* Bump histogram from 0.11.0 to 0.11.1 (#3377)
* Bump js-sys from 0.3.72 to 0.3.74 (#3412)
* Bump memmap2 from 0.9.4 to 0.9.5 (#3326)
* Bump myst-parser from 3.0.1 to 4.0.0 (#3277)
* Bump needletail from 0.5.1 to 0.6.0 (#3376)
* Bump pypa/cibuildwheel from 2.19.2 to 2.20.0 (#3278)
* Bump pypa/cibuildwheel from 2.20.0 to 2.21.1 (#3332)
* Bump pypa/cibuildwheel from 2.21.1 to 2.21.2 (#3345)
* Bump pypa/cibuildwheel from 2.21.2 to 2.21.3 (#3353)
* Bump pypa/cibuildwheel from 2.21.3 to 2.22.0 (#3408)
* Bump roaring from 0.10.6 to 0.10.7 (#3413)
* Bump serde from 1.0.204 to 1.0.207 (#3289)
* Bump serde from 1.0.207 to 1.0.208 (#3298)
* Bump serde from 1.0.208 to 1.0.209 (#3310)
* Bump serde from 1.0.209 to 1.0.210 (#3318)
* Bump serde from 1.0.210 to 1.0.214 (#3368)
* Bump serde from 1.0.214 to 1.0.215 (#3403)
* Bump serde_json from 1.0.120 to 1.0.121 (#3267)
* Bump serde_json from 1.0.121 to 1.0.122 (#3280)
* Bump serde_json from 1.0.122 to 1.0.124 (#3288)
* Bump serde_json from 1.0.124 to 1.0.125 (#3302)
* Bump serde_json from 1.0.125 to 1.0.127 (#3309)
* Bump serde_json from 1.0.127 to 1.0.128 (#3316)
* Bump serde_json from 1.0.128 to 1.0.132 (#3358)
* Bump serde_json from 1.0.132 to 1.0.133 (#3402)
* Bump sphinx-design from 0.5.0 to 0.6.0 (#3268)
* Bump sphinx-design from 0.6.0 to 0.6.1 (#3276)
* Bump tempfile from 3.10.1 to 3.11.0 (#3279)
* Bump tempfile from 3.11.0 to 3.12.0 (#3287)
* Bump tempfile from 3.12.0 to 3.13.0 (#3340)
* Bump tempfile from 3.13.0 to 3.14.0 (#3391)
* Bump thiserror from 1.0.63 to 1.0.64 (#3335)
* Bump thiserror from 1.0.64 to 1.0.65 (#3367)
* Bump thiserror from 1.0.65 to 1.0.68 (#3379)
* Bump thiserror from 1.0.68 to 2.0.3 (#3389)
* Bump web-sys from 0.3.69 to 0.3.70 (#3299)
* Bump web-sys from 0.3.70 to 0.3.72 (#3354)
* Bump web-sys from 0.3.72 to 0.3.74 (#3411)
* Update pytest-cov requirement from <6.0,>=4 to >=4,<7.0 (#3375)
* Update sphinx requirement from <8,>=6 to >=6,<9 (#3269)
* Upgrade rocksdb to 0.22.0, bump MSRV to 1.66  (#3383)
* [pre-commit.ci] pre-commit autoupdate (#3281)
* [pre-commit.ci] pre-commit autoupdate (#3290)
* [pre-commit.ci] pre-commit autoupdate (#3312)
* [pre-commit.ci] pre-commit autoupdate (#3330)
* [pre-commit.ci] pre-commit autoupdate (#3336)
* [pre-commit.ci] pre-commit autoupdate (#3341)
* [pre-commit.ci] pre-commit autoupdate (#3346)
* [pre-commit.ci] pre-commit autoupdate (#3360)
* [pre-commit.ci] pre-commit autoupdate (#3369)
* [pre-commit.ci] pre-commit autoupdate (#3380)
* [pre-commit.ci] pre-commit autoupdate (#3393)
* [pre-commit.ci] pre-commit autoupdate (#3404)
* [pre-commit.ci] pre-commit autoupdate (#3409)
* [pre-commit.ci] pre-commit autoupdate (#3414)
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

1 participant