bugfix: this should be a "path" so that the file is made available to…

… the container
sanger-tol · May 31, 2024 · 765bc8c · 765bc8c
1 parent 7303eb8
commit 765bc8c
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/modules/local/generate_config.nf b/modules/local/generate_config.nf
@@ -10,7 +10,7 @@ process GENERATE_CONFIG {
     val taxon_query
     val busco_lin
     path lineage_tax_ids
-    tuple val(meta2), val(blastn)
+    tuple val(meta2), path(blastn)
 
     output:
     tuple val(meta), path("*.yaml"), emit: yaml