bugfix: --busco is optional

sanger-tol · May 31, 2024 · 7303eb8 · 7303eb8
1 parent 47bd652
commit 7303eb8
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/bin/generate_config.py b/bin/generate_config.py
@@ -35,7 +35,7 @@ def parse_args(args=None):
     parser.add_argument("--yml_out", required=True, help="Output YML file.")
     parser.add_argument("--csv_out", required=True, help="Output CSV file.")
     parser.add_argument("--accession", help="Accession number of the assembly (optional).", default=None)
-    parser.add_argument("--busco", required=True, help="Requested BUSCO lineages.", default=None)
+    parser.add_argument("--busco", help="Requested BUSCO lineages.", default=None)
     parser.add_argument("--blastn", required=True, help="Path to the NCBI Taxonomy database")
     parser.add_argument("--version", action="version", version="%(prog)s 1.4")
     return parser.parse_args(args)