Merge pull request #16 from jmccreight/development #1
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| name: CI | |
| on: | |
| push: | |
| branches: | |
| - "*" | |
| - "!v[0-9]+.[0-9]+.[0-9]+*" | |
| pull_request: | |
| branches: | |
| - "*" | |
| - "!v[0-9]+.[0-9]+.[0-9]+*" | |
| workflow_dispatch: | |
| inputs: | |
| debug_enabled: | |
| type: boolean | |
| description: 'Run the build with tmate debugging enabled (https://github.com/marketplace/actions/debugging-with-tmate)' | |
| required: false | |
| default: false | |
| jobs: | |
| pyprms_setup: | |
| name: standard installation | |
| runs-on: ubuntu-latest | |
| strategy: | |
| fail-fast: false | |
| defaults: | |
| run: | |
| shell: bash | |
| steps: | |
| - name: Checkout repo | |
| uses: actions/checkout@v4 | |
| - name: Setup Python | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: "3.10" | |
| - name: Upgrade pip and install build and twine | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install wheel build 'twine<5.0.0' 'importlib_metadata<=7.0.1' 'setuptools<=72.2.0' 'numpy<2.0' | |
| - name: Base installation | |
| run: | | |
| pip --verbose install . | |
| - name: Print pyPRMS version | |
| run: | | |
| python -c "import pyPRMS; print(pyPRMS.__version__)" | |
| - name: Build pyPRMS, check dist outputs | |
| run: | | |
| python -m build | |
| twine check --strict dist/* | |
| # pyws_lint: | |
| # name: linting | |
| # runs-on: ubuntu-latest | |
| # strategy: | |
| # fail-fast: false | |
| # defaults: | |
| # run: | |
| # shell: bash | |
| # steps: | |
| # - name: Checkout repo | |
| # uses: actions/checkout@v4 | |
| # - name: Setup Python | |
| # uses: actions/setup-python@v5 | |
| # with: | |
| # python-version: "3.10" | |
| # - name: Install dependencies | |
| # run: | | |
| # pip install wheel | |
| # pip install . | |
| # pip install ".[lint]" | |
| # - name: Version info | |
| # run: | | |
| # pip -V | |
| # pip list | |
| # - name: Lint | |
| # run: ruff check . | |
| # - name: Format | |
| # run: ruff format --check . | |
| # test: | |
| # name: ${{ matrix.os }} py${{ matrix.python-version }} | |
| # runs-on: ${{ matrix.os }} | |
| # defaults: | |
| # run: | |
| # shell: bash -l {0} | |
| # strategy: | |
| # fail-fast: false | |
| # matrix: | |
| # os: [ "ubuntu-latest", "macos-latest", "windows-latest" ] | |
| # python-version: ["3.10", "3.11"] | |
| # steps: | |
| # - name: Free Disk Space (Ubuntu) | |
| # if: runner.os == 'Linux' | |
| # uses: jlumbroso/free-disk-space@main | |
| # with: | |
| # tool-cache: false | |
| # android: true | |
| # dotnet: true | |
| # haskell: true | |
| # large-packages: true | |
| # docker-images: true | |
| # swap-storage: true | |
| # - name: Checkout repo | |
| # uses: actions/checkout@v4 | |
| # - name: Setup gfortran | |
| # uses: fortran-lang/setup-fortran@v1 | |
| # with: | |
| # compiler: gcc | |
| # version: 11 | |
| # - name: Link gfortran dylibs on Mac | |
| # if: runner.os == 'macOS' | |
| # run: .github/scripts/symlink_gfortran_mac.sh | |
| # - name: Install Dependencies via Micromamba | |
| # uses: mamba-org/[email protected] | |
| # with: | |
| # micromamba-version: '1.5.10-0' | |
| # log-level: debug | |
| # environment-file: environment.yml | |
| # cache-environment: true | |
| # cache-downloads: true | |
| # create-args: >- | |
| # python=${{matrix.python-version}} | |
| # - name: Install pywatershed | |
| # run: | | |
| # pip install . | |
| # - name: Version info | |
| # run: | | |
| # pip -V | |
| # pip list | |
| # - name: Get GIS files for tests | |
| # run: | | |
| # python pywatershed/utils/gis_files.py | |
| # - name: domainless - run tests not requiring domain data | |
| # working-directory: autotest | |
| # run: pytest -m domainless -n=auto -vv | |
| # - name: sagehen_5yr_no_cascades - generate and manage test data domain, run PRMS and convert csv output to NetCDF | |
| # working-directory: autotest | |
| # run: | | |
| # python generate_test_data.py \ | |
| # -n=auto --domain=sagehen_5yr --control_pattern=sagehen_no_cascades.control \ | |
| # --remove_prms_csvs --remove_prms_output_dirs | |
| # - name: sagehen_5yr_no_cascades - list netcdf input files | |
| # working-directory: test_data | |
| # run: | | |
| # find sagehen_5yr/output_no_cascades -name '*.nc' | |
| # - name: sagehen_5yr_no_cascades - pywatershed tests | |
| # working-directory: autotest | |
| # run: pytest | |
| # -vv | |
| # -rs | |
| # -n=auto | |
| # -m "not domainless" | |
| # --domain=sagehen_5yr | |
| # --control_pattern=sagehen_no_cascades.control | |
| # --durations=0 | |
| # --cov=pywatershed | |
| # --cov-report=xml | |
| # --junitxml=pytest_sagehen_5yr_no_cascades.xml | |
| # - name: Upload test results | |
| # if: always() | |
| # uses: actions/upload-artifact@v4 | |
| # with: | |
| # name: Test results for ${{ runner.os }}-${{ matrix.python-version }} | |
| # path: | | |
| # ./autotest/pytest_hru_1_nhm.xml | |
| # ./autotest/pytest_drb_2yr_nhm.xml | |
| # ./autotest/pytest_drb_2yr_no_dprst.xml | |
| # ./autotest/pytest_ucb_2yr_nhm.xml | |
| # - name: Upload code coverage to Codecov | |
| # uses: codecov/codecov-action@v3 | |
| # with: | |
| # file: ./autotest/coverage.xml # should be just the ucb result | |
| # # flags: unittests | |
| # env_vars: RUNNER_OS,PYTHON_VERSION | |
| # # name: codecov-umbrella | |
| # fail_ci_if_error: false | |
| # version: "v0.1.15" |