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ci.yaml
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name: CI
on:
push:
branches:
- "*"
- "!v[0-9]+.[0-9]+.[0-9]+*"
pull_request:
branches:
- "*"
- "!v[0-9]+.[0-9]+.[0-9]+*"
workflow_dispatch:
inputs:
debug_enabled:
type: boolean
description: 'Run the build with tmate debugging enabled (https://github.com/marketplace/actions/debugging-with-tmate)'
required: false
default: false
jobs:
pyprms_setup:
name: standard installation
runs-on: ubuntu-latest
strategy:
fail-fast: false
defaults:
run:
shell: bash
steps:
- name: Checkout repo
uses: actions/checkout@v4
- name: Setup Python
uses: actions/setup-python@v5
with:
python-version: "3.10"
- name: Upgrade pip and install build and twine
run: |
python -m pip install --upgrade pip
pip install wheel build 'twine<5.0.0' 'importlib_metadata<=7.0.1' 'setuptools<=72.2.0' 'numpy<2.0'
- name: Base installation
run: |
pip --verbose install .
- name: Print pyPRMS version
run: |
python -c "import pyPRMS; print(pyPRMS.__version__)"
- name: Build pyPRMS, check dist outputs
run: |
python -m build
twine check --strict dist/*
# pyws_lint:
# name: linting
# runs-on: ubuntu-latest
# strategy:
# fail-fast: false
# defaults:
# run:
# shell: bash
# steps:
# - name: Checkout repo
# uses: actions/checkout@v4
# - name: Setup Python
# uses: actions/setup-python@v5
# with:
# python-version: "3.10"
# - name: Install dependencies
# run: |
# pip install wheel
# pip install .
# pip install ".[lint]"
# - name: Version info
# run: |
# pip -V
# pip list
# - name: Lint
# run: ruff check .
# - name: Format
# run: ruff format --check .
# test:
# name: ${{ matrix.os }} py${{ matrix.python-version }}
# runs-on: ${{ matrix.os }}
# defaults:
# run:
# shell: bash -l {0}
# strategy:
# fail-fast: false
# matrix:
# os: [ "ubuntu-latest", "macos-latest", "windows-latest" ]
# python-version: ["3.10", "3.11"]
# steps:
# - name: Free Disk Space (Ubuntu)
# if: runner.os == 'Linux'
# uses: jlumbroso/free-disk-space@main
# with:
# tool-cache: false
# android: true
# dotnet: true
# haskell: true
# large-packages: true
# docker-images: true
# swap-storage: true
# - name: Checkout repo
# uses: actions/checkout@v4
# - name: Setup gfortran
# uses: fortran-lang/setup-fortran@v1
# with:
# compiler: gcc
# version: 11
# - name: Link gfortran dylibs on Mac
# if: runner.os == 'macOS'
# run: .github/scripts/symlink_gfortran_mac.sh
# - name: Install Dependencies via Micromamba
# uses: mamba-org/[email protected]
# with:
# micromamba-version: '1.5.10-0'
# log-level: debug
# environment-file: environment.yml
# cache-environment: true
# cache-downloads: true
# create-args: >-
# python=${{matrix.python-version}}
# - name: Install pywatershed
# run: |
# pip install .
# - name: Version info
# run: |
# pip -V
# pip list
# - name: Get GIS files for tests
# run: |
# python pywatershed/utils/gis_files.py
# - name: domainless - run tests not requiring domain data
# working-directory: autotest
# run: pytest -m domainless -n=auto -vv
# - name: sagehen_5yr_no_cascades - generate and manage test data domain, run PRMS and convert csv output to NetCDF
# working-directory: autotest
# run: |
# python generate_test_data.py \
# -n=auto --domain=sagehen_5yr --control_pattern=sagehen_no_cascades.control \
# --remove_prms_csvs --remove_prms_output_dirs
# - name: sagehen_5yr_no_cascades - list netcdf input files
# working-directory: test_data
# run: |
# find sagehen_5yr/output_no_cascades -name '*.nc'
# - name: sagehen_5yr_no_cascades - pywatershed tests
# working-directory: autotest
# run: pytest
# -vv
# -rs
# -n=auto
# -m "not domainless"
# --domain=sagehen_5yr
# --control_pattern=sagehen_no_cascades.control
# --durations=0
# --cov=pywatershed
# --cov-report=xml
# --junitxml=pytest_sagehen_5yr_no_cascades.xml
# - name: Upload test results
# if: always()
# uses: actions/upload-artifact@v4
# with:
# name: Test results for ${{ runner.os }}-${{ matrix.python-version }}
# path: |
# ./autotest/pytest_hru_1_nhm.xml
# ./autotest/pytest_drb_2yr_nhm.xml
# ./autotest/pytest_drb_2yr_no_dprst.xml
# ./autotest/pytest_ucb_2yr_nhm.xml
# - name: Upload code coverage to Codecov
# uses: codecov/codecov-action@v3
# with:
# file: ./autotest/coverage.xml # should be just the ucb result
# # flags: unittests
# env_vars: RUNNER_OS,PYTHON_VERSION
# # name: codecov-umbrella
# fail_ci_if_error: false
# version: "v0.1.15"