Repositories list

• scadnano

  Public
  Web application for designing DNA structures such as DNA origami.

  dna-sequencescadnanodna-origami+ 1dna-structures

  Dart

  •

  MIT License

  •13•25•188•5•Updated Dec 9, 2024Dec 9, 2024

• nuad

  Public
  Nucleic acid sequence designer

  Jupyter Notebook

  •

  MIT License

  •6•9•36•3•Updated Nov 22, 2024Nov 22, 2024

• scadnano-python-package

  Public
  Python scripting library for generating designs readable by scadnano.

  dna-sequencescadnanodna-structures+ 1dna-origami

  Python

  •

  MIT License

  •7•15•41•4•Updated Oct 26, 2024Oct 26, 2024

• gpac

  Public
  package for numerically integrating differential equations (front-end for scipy.solve_ivp) using simpler syntax than scipy

  Jupyter Notebook

  •

  MIT License

  •0•1•0•0•Updated Sep 28, 2024Sep 28, 2024

• labelator

  Public
  Python package for creating PDF documents that can be printed onto circular sticky labels that can be stuck to test tubes.

  Python

  •

  MIT License

  •0•0•0•0•Updated Aug 5, 2024Aug 5, 2024

• ppsim

  Public
  Python package for simulating population protocols

  Python

  •

  MIT License

  •5•10•19•0•Updated Oct 11, 2023Oct 11, 2023

• simd-dna

  Public
  A Python simulator for the SIMD||DNA model of computation, as defined in the paper https://doi.org/10.1007/978-3-030-26807-7_12

  Python

  •

  MIT License

  •3•3•0•0•Updated Mar 11, 2023Mar 11, 2023

• simd-dna-web-simulator

  Public
  A visual simulator for the SIMD||DNA model

  TypeScript

  •0•0•0•0•Updated May 31, 2022May 31, 2022