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    • MCSTrack

      Public
      Multi-camera spatial tracking
      Python
      MIT License
      40200Updated Nov 29, 2024Nov 29, 2024
    • Collection of utilities that are not polished implementations but can be useful to users
      Python
      BSD 2-Clause "Simplified" License
      2473122Updated Oct 23, 2024Oct 23, 2024
    • Deep learning software modules for image-guided medical procedures
      Jupyter Notebook
      BSD 3-Clause "New" or "Revised" License
      43000Updated Oct 12, 2024Oct 12, 2024
    • 3D Slicer extension for exporting Slicer scenes to use in the OpenAnatomy.org browser
      Python
      61762Updated Sep 25, 2024Sep 25, 2024
    • segmentation AI training code
      Jupyter Notebook
      BSD 3-Clause "New" or "Revised" License
      43000Updated Sep 16, 2024Sep 16, 2024
    • Materials for the yearly PerkLab bootcamp course
      318600Updated Sep 3, 2024Sep 3, 2024
    • This repository contains the SlicerFreeSurferImporter extension for 3D Slicer. The extension implements a module for importing models, scalar overlays, and segmentations from FreeSurfer, as well as handling the transformation of models from FreeSurfer to Slicer coordinates.
      C++
      BSD 3-Clause "New" or "Revised" License
      413110Updated May 8, 2024May 8, 2024
    • MatlabBridge extension for 3D Slicer
      MATLAB
      81760Updated Apr 23, 2024Apr 23, 2024
    • 3D Slicer extension for generating 3D-printable skin moulds for radiation therapy
      Python
      BSD 3-Clause "New" or "Revised" License
      3310Updated Apr 23, 2024Apr 23, 2024
    • 3D Slicer extension for clipping volume with surface or ROI box
      Python
      4000Updated Apr 23, 2024Apr 23, 2024
    • Codebase for the project titled "Development of a research testbed for intraoperative optical spectroscopy tumour margin assessment" conducted by David Morton 2021-2023.
      Jupyter Notebook
      00290Updated Dec 27, 2023Dec 27, 2023
    • Python
      2200Updated Oct 21, 2023Oct 21, 2023
    • Spinal needle guidance based on ultrasound imaging
      Python
      BSD 3-Clause "New" or "Revised" License
      0410Updated Jul 4, 2023Jul 4, 2023
    • PolySeg

      Public
      Library for polymorph segmentation representation for medical image computing
      C++
      BSD 2-Clause "Simplified" License
      42141Updated Jun 13, 2023Jun 13, 2023
    • Tool for breast reconstruction surgery planning
      Python
      0200Updated Feb 1, 2023Feb 1, 2023
    • Python
      0000Updated Dec 2, 2022Dec 2, 2022
    • Repository for free experimentation with github
      Python
      41200Updated May 24, 2022May 24, 2022
    • Python
      0000Updated Apr 29, 2022Apr 29, 2022
    • Python
      0100Updated Apr 21, 2022Apr 21, 2022
    • Tools for analyzing Navigated Lumpectomy data
      Python
      0100Updated Mar 26, 2021Mar 26, 2021
    • TRUS and prostate biopsy training simulator
      Python
      0000Updated Nov 27, 2020Nov 27, 2020
    • This repo contains a slicer module for generating point clouds from static or streamed depth images.
      Python
      1400Updated May 1, 2020May 1, 2020
    • Tracked ultrasound to make skull registration more accurate.
      Python
      1000Updated Feb 28, 2020Feb 28, 2020
    • Python
      0100Updated Feb 7, 2020Feb 7, 2020
    • A set of tools to analyze the curvature of colon segmentations.
      Python
      0500Updated Jan 4, 2020Jan 4, 2020
    • Hands on tutorial for SlicerIGT at CARS 2019. SlicerIGT home page: http://www.slicerigt.org/wp/
      Jupyter Notebook
      Apache License 2.0
      0300Updated Jun 15, 2019Jun 15, 2019
    • Instructions for setting up 3D Slicer based "Operation" game for outreach events for kids
      BSD 3-Clause "New" or "Revised" License
      0200Updated May 14, 2019May 14, 2019
    • Python
      0000Updated Apr 23, 2019Apr 23, 2019
    • C#
      2560Updated Nov 19, 2018Nov 19, 2018
    • Python
      0010Updated Nov 14, 2018Nov 14, 2018