commit-link" data-hovercard-type="commit" data-hovercard-url="https://github.com/neuroinformatics-unit/derotation/commit/16734d028fc9e3c997e23454a75392b6d7e788d1/hovercard" href="https://github.com/neuroinformatics-unit/derotation/commit/16734d028fc9e3c997e23454a75392b6d7e788d1">16734d0 Author: lauraporta <29216006+lauraporta@users.noreply.github.com> Date: Fri Oct 25 13:59:25 2024 +0100 Add docstrings and description on the very long test integration module commit 89f8a77 Author: lauraporta <29216006+lauraporta@users.noreply.github.com> Date: Fri Oct 25 11:55:19 2024 +0100 Small refactor conftests commit eb60b72 Author: lauraporta <29216006+lauraporta@users.noreply.github.com> Date: Thu Oct 24 18:36:25 2024 +0100 Move out assertions handling in a separate function, handle paths differently and reorganize part of the fixtures commit 758a498 Author: lauraporta <29216006+lauraporta@users.noreply.github.com> Date: Thu Oct 24 17:31:21 2024 +0100 Add spaces to improve table formatting commit 141daa4 Author: lauraporta <29216006+lauraporta@users.noreply.github.com> Date: Thu Oct 24 17:23:26 2024 +0100 Add readme to describe the way regression tests work commit 02fbadd Author: lauraporta <29216006+lauraporta@users.noreply.github.com> Date: Thu Oct 24 17:02:45 2024 +0100 Add more comments, docstrings and typing in regression tests files to regenerate target images commit 5a83168 Author: lauraporta <29216006+lauraporta@users.noreply.github.com> Date: Thu Oct 24 16:07:13 2024 +0100 Remove repeated functions commit fc2d9a7 Author: lauraporta <29216006+lauraporta@users.noreply.github.com> Date: Thu Oct 24 15:34:23 2024 +0100 Move in separate files the logic to recreate the images for regression tests commit 5137eb2 Author: lauraporta <29216006+lauraporta@users.noreply.github.com> Date: Thu Oct 17 21:21:07 2024 +0100 Apply suggestions from PR review commit cf3998d Author: lauraporta <29216006+lauraporta@users.noreply.github.com> Date: Mon Oct 14 14:16:54 2024 +0100 Simplify filter commit 3f631bf Author: lauraporta <29216006+lauraporta@users.noreply.github.com> Date: Fri Oct 4 11:32:45 2024 +0100 Move the plots of the integration script into the integration test commit aa37d4e Author: lauraporta <29216006+lauraporta@users.noreply.github.com> Date: Fri Oct 4 11:16:48 2024 +0100 Fix mypy error messages commit ff55b72 Author: lauraporta <29216006+lauraporta@users.noreply.github.com> Date: Thu Oct 3 18:30:46 2024 +0100 WIP docs commit 0737e65 Author: lauraporta <29216006+lauraporta@users.noreply.github.com> Date: Thu Oct 3 16:50:59 2024 +0100 Update workflows and add dependabot yml commit 81a72c8 Author: lauraporta <29216006+lauraporta@users.noreply.github.com> Date: Thu Oct 3 16:35:39 2024 +0100 Increase the tolerance and improve error message commit e45ff2c Author: lauraporta <29216006+lauraporta@users.noreply.github.com> Date: Thu Oct 3 16:16:34 2024 +0100 Let's accept little differences in the derotation commit a941f41 Author: lauraporta <29216006+lauraporta@users.noreply.github.com> Date: Thu Oct 3 16:00:01 2024 +0100 Also do't need the folder commit 1f8ded8 Author: lauraporta <29216006+lauraporta@users.noreply.github.com> Date: Thu Oct 3 15:57:42 2024 +0100 Don't need to save plots in tests commit ef186f9 Author: lauraporta <29216006+lauraporta@users.noreply.github.com> Date: Thu Oct 3 15:52:45 2024 +0100 Add integration tests on the integration of the two pipelines to find the center of rotation commit 10ec8e8 Author: lauraporta <29216006+lauraporta@users.noreply.github.com> Date: Thu Oct 3 15:16:13 2024 +0100 Move logic to get the largest blob in a separate method commit a211832 Author: lauraporta <29216006+lauraporta@users.noreply.github.com> Date: Thu Oct 3 14:33:17 2024 +0100 Move the plots out of the main function in integration script commit 7a00c37 Author: lauraporta <29216006+lauraporta@users.noreply.github.com> Date: Thu Oct 3 14:13:09 2024 +0100 Fix pytest error (missing required property) commit d69ec18 Author: lauraporta <29216006+lauraporta@users.noreply.github.com> Date: Thu Oct 3 14:12:43 2024 +0100 Uncomment part of plotting hooks commit dddbaf3 Author: lauraporta <29216006+lauraporta@users.noreply.github.com> Date: Thu Oct 3 14:12:30 2024 +0100 Reorganize examples commit 48c8b54 Author: lauraporta <29216006+lauraporta@users.noreply.github.com> Date: Mon Sep 30 17:10:45 2024 +0100 Add another debugging plot commit 3d5c1ce Author: lauraporta <29216006+lauraporta@users.noreply.github.com> Date: Mon Sep 30 17:10:14 2024 +0100 Use the script to test with a different center of rotation, works when checking for correct order of x-y coordinates commit 52be41c Author: lauraporta <29216006+lauraporta@users.noreply.github.com> Date: Mon Sep 30 15:51:07 2024 +0100 Use blank pixel commit 8963f5f Author: lauraporta <29216006+lauraporta@users.noreply.github.com> Date: Mon Sep 30 15:43:58 2024 +0100 Comment one hook commit a4dc480 Author: lauraporta <29216006+lauraporta@users.noreply.github.com> Date: Mon Sep 30 15:37:18 2024 +0100 WIP: script to test the integration of the two pipelines to find the center of rotation and then derotate commit d783005 Author: lauraporta <29216006+lauraporta@users.noreply.github.com> Date: Mon Sep 30 15:35:33 2024 +0100 WIP: finding the center of rotation via ellipse fitting commit fde0592 Author: lauraporta <29216006+lauraporta@users.noreply.github.com> Date: Mon Sep 30 15:31:33 2024 +0100 Fix angle indices bug in Rotator commit ca6cc03 Author: lauraporta <29216006+lauraporta@users.noreply.github.com> Date: Mon Sep 30 15:28:47 2024 +0100 Plotting bug fixed commit 0dd3c6d Author: lauraporta <29216006+lauraporta@users.noreply.github.com> Date: Mon Sep 30 15:28:06 2024 +0100 Change variable names in plotting hooks commit bfa4443 Author: lauraporta <29216006+lauraporta@users.noreply.github.com> Date: Mon Sep 30 15:25:35 2024 +0100 Remove hooks from pipeline commit 2779819 Author: lauraporta <29216006+lauraporta@users.noreply.github.com> Date: Fri Sep 27 14:37:27 2024 +0100 Clean up and refactor the main pipeline around the center of rotation feature - also make separate module for hooks commit edee980 Author: lauraporta <29216006+lauraporta@users.noreply.github.com> Date: Fri Sep 27 14:10:04 2024 +0100 Add wrongly deleted hook commit c4f9d14 Author: lauraporta <29216006+lauraporta@users.noreply.github.com> Date: Fri Sep 27 14:09:21 2024 +0100 Add test for derotation with different centre commit 0721e5d Author: lauraporta <29216006+lauraporta@users.noreply.github.com> Date: Fri Sep 27 13:53:58 2024 +0100 Add new generated derotated squares: faster derotation by line leads to worse performance... commit df141be Author: lauraporta <29216006+lauraporta@users.noreply.github.com> Date: Fri Sep 27 13:19:23 2024 +0100 Update tests with new derotation version commit 765c4de Author: lauraporta <29216006+lauraporta@users.noreply.github.com> Date: Fri Sep 27 13:14:36 2024 +0100 Update tests rotator with different center commit c0423a0 Author: lauraporta <29216006+lauraporta@users.noreply.github.com> Date: Fri Sep 27 11:49:39 2024 +0100 Remove linear interpolation and recompute test images - now it's a square of different gray lines commit 1412348 Author: lauraporta <29216006+lauraporta@users.noreply.github.com> Date: Thu Sep 26 16:21:46 2024 +0100 Resolve naming (in many cases with "rotation" I meant derotation) commit 860a2fa Author: lauraporta <29216006+lauraporta@users.noreply.github.com> Date: Thu Sep 26 16:08:21 2024 +0100 WIP: changing the main derotation by line algorithm commit e5cac06 Author: lauraporta <29216006+lauraporta@users.noreply.github.com> Date: Thu Sep 26 15:50:05 2024 +0100 Update basic rotator to include different center of rotation commit 35a0b7f Merge: a0c6017 c825a82 Author: lauraporta <29216006+lauraporta@users.noreply.github.com> Date: Thu Sep 26 15:06:45 2024 +0100 Merge commit 'c825a828116dd382d8e9f8e1695c46adcdb94ecc' into feature/finding-centre-of-rotation commit c825a82 Author: lauraporta <29216006+lauraporta@users.noreply.github.com> Date: Thu Sep 26 14:59:10 2024 +0100 Delete duplicate file commit c3cf60e Author: lauraporta <29216006+lauraporta@users.noreply.github.com> Date: Thu Sep 26 14:42:53 2024 +0100 Add tests commit 55b080e Author: lauraporta <29216006+lauraporta@users.noreply.github.com> Date: Thu Sep 26 14:41:05 2024 +0100 Fix Rotator and join it with the derotator in an example commit 4832672 Author: lauraporta <29216006+lauraporta@users.noreply.github.com> Date: Thu Sep 26 14:39:37 2024 +0100 Make function name consistent commit c913a06 Author: lauraporta <29216006+lauraporta@users.noreply.github.com> Date: Wed Sep 25 17:40:25 2024 +0100 Add basic tests commit dfe659a Author: lauraporta <29216006+lauraporta@users.noreply.github.com> Date: Wed Sep 25 17:15:19 2024 +0100 Add docstrings commit 29e9d27 Author: lauraporta <29216006+lauraporta@users.noreply.github.com> Date: Wed Sep 25 17:11:07 2024 +0100 Add basic rotator and a simple usage of it commit a0c6017 Author: lauraporta <29216006+lauraporta@users.noreply.github.com> Date: Wed Sep 25 16:28:37 2024 +0100 WIP 🏗️: draft pipeline for adapting center of rotation commit 6000609 Author: lauraporta <29216006+lauraporta@users.noreply.github.com> Date: Wed Sep 25 16:24:55 2024 +0100 Improve debug plots commit 9bf17eb Author: lauraporta <29216006+lauraporta@users.noreply.github.com> Date: Wed Sep 25 16:24:26 2024 +0100 Add plotting hooks and further params to main derotate by line function commit aae7c67 Author: lauraporta <29216006+lauraporta@users.noreply.github.com> Date: Mon Sep 23 16:29:24 2024 +0100 Fixes debugging plots and logging usage commit 174fd9e Author: lauraporta <29216006+lauraporta@users.noreply.github.com> Date: Thu Sep 19 16:48:00 2024 +0100 Include usage of center of rotation in main pipeline commit f6adedf Author: lauraporta <29216006+lauraporta@users.noreply.github.com> Date: Thu Sep 19 16:35:41 2024 +0100 Add working methods to find center of rotation 🎉 commit b76a30a Author: lauraporta <29216006+lauraporta@users.noreply.github.com> Date: Mon Sep 16 11:36:50 2024 +0100 Reorganize methods order commit 168100a Author: lauraporta <29216006+lauraporta@users.noreply.github.com> Date: Mon Sep 16 11:26:07 2024 +0100 Add empty method

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