tests

[Testing] Test SSH file transfer with images. #1042

	name: tests

	on:
	push:
	branches:
	- main
	tags:
	- '*'
	pull_request:

	jobs:
	linting:
	runs-on: ubuntu-latest
	steps:
	- uses: neuroinformatics-unit/actions/lint@v2

	test:
	needs: [linting]
	name: ${{ matrix.os }} py${{ matrix.python-version }}
	runs-on: ${{ matrix.os }}

	defaults:
	run:
	shell: bash -l {0}

	strategy:
	matrix:
	os: [windows-latest, macos-latest, macos-14, ubuntu-latest]
	python-version: ["3.8", "3.9", "3.10", "3.11"]

	steps:
	- uses: actions/checkout@v4
	- name: Set up Conda
	uses: conda-incubator/setup-miniconda@v3
	with:
	python-version: ${{ matrix.python-version }}
	auto-update-conda: true
	channels: conda-forge
	activate-environment: "true"
	- name: Install RClone
	run: \|
	conda activate true
	conda install -c conda-forge rclone
	- name: Install dependencies
	run: \|
	python -m pip install --upgrade pip
	pip install .[dev]
	- name: Test
	run: \|
	if [ "$RUNNER_OS" == "Linux" ]; then
	sudo service mysql stop # free up port 3306 for ssh tests: https://github.com/orgs/community/discussions/25550
	pytest
	else
	pytest -k "not test_combinations_ssh_transfer and not test_ssh_setup"
	fi

	build_sdist_wheels:
	name: Build source distribution
	needs: [test]
	if: github.event_name == 'push' && github.ref_type == 'tag'
	runs-on: ubuntu-latest
	steps:
	- uses: neuroinformatics-unit/actions/build_sdist_wheels@v2


	upload_all:
	name: Publish build distributions
	needs: [build_sdist_wheels]
	runs-on: ubuntu-latest
	steps:
	- uses: neuroinformatics-unit/actions/upload_pypi@v2
	with:
	secret-pypi-key: ${{ secrets.TWINE_API_KEY }}

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