Fix tests after textual changes (#446) #1198
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| name: tests | |
| on: | |
| push: | |
| branches: | |
| - main | |
| tags: | |
| - '*' | |
| pull_request: | |
| schedule: | |
| # Weekly cron job at 12:00 AM UTC on Mondays. | |
| # This will only run on main by default. | |
| - cron: '0 0 * * 1' | |
| jobs: | |
| linting: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: neuroinformatics-unit/actions/lint@v2 | |
| test: | |
| needs: [linting] | |
| name: ${{ matrix.os }} py${{ matrix.python-version }} | |
| runs-on: ${{ matrix.os }} | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| strategy: | |
| matrix: | |
| # macos-14 is M1, macos-13 is intel. Run on earliest and | |
| # latest python versions. All python versions are tested in | |
| # the weekly cron job. | |
| os: [windows-latest, ubuntu-latest, macos-14, macos-13] | |
| # Test all Python versions for cron job, and only first/last for other triggers | |
| python-version: ${{ fromJson(github.event_name == 'schedule' && '["3.9", "3.10", "3.11", "3.12"]' || '["3.9", "3.12"]') }} | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Set up Conda | |
| uses: conda-incubator/setup-miniconda@v3 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| auto-update-conda: true | |
| channels: conda-forge | |
| activate-environment: "datashuttle-test" | |
| - name: Install datashuttle with conda | |
| run: | | |
| conda activate datashuttle-test | |
| conda install -c conda-forge datashuttle | |
| - name: Install local datashuttle for testing | |
| run: | | |
| # --force will only uninstall datashuttle not dependencies | |
| conda uninstall datashuttle --force | |
| python -m pip install --upgrade pip | |
| pip install .[dev] | |
| - name: Test | |
| run: pytest | |
| build_sdist_wheels: | |
| name: Build source distribution | |
| needs: [test] | |
| if: github.event_name == 'push' && github.ref_type == 'tag' | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: neuroinformatics-unit/actions/build_sdist_wheels@v2 | |
| upload_all: | |
| name: Publish build distributions | |
| needs: [build_sdist_wheels] | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: neuroinformatics-unit/actions/upload_pypi@v2 | |
| with: | |
| secret-pypi-key: ${{ secrets.TWINE_API_KEY }} |