This repository contains all the results, data and scripts required to replicate the Exomiser vs. LLM experiments.

To run all the experiments you will need to install the Exomiser and OntoGPT plugins for PhEval, instructions for this can be found in the tool_configurations directory as well as bash scripts to run the experiments.

The corpora used to generate the results are found in the corpora directory.

All prompts used in the experiments are found in the LLM_prompts directory.

Results generated from the experiments can be found under results.

Details on how to run the benchmarking analysis can be found in the benchmark directory.