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@hubmapconsortium

HuBMAP Consortium

This is the GitHub organization for repos related to the work of the HuBMAP Consortium.

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  1. entity-api entity-api Public

    A set of web service calls to return information about HuBMAP entities

    Python 3 1

  2. gateway gateway Public

    Python

  3. search-api search-api Public

    HuBMAP search service and associated pieces to create an index

    Python 2 2

  4. portal-ui portal-ui Public

    HuBMAP Data Portal front end

    TypeScript 12 2

  5. ingest-ui ingest-ui Public

    HuBMAP Data Ingest Portal

    JavaScript 4

  6. ingest-pipeline ingest-pipeline Public

    Data ingest pipeline(s) for QA/metadata etl/post-processing

    Python 4 5

Repositories

Showing 10 of 175 repositories
  • hra-ui Public

    HRA UIs Monorepo (includes HRA Portal, EUI, RUI, ASCT+B Reporter, and more)

    hubmapconsortium/hra-ui’s past year of commit activity
    TypeScript 4 MIT 2 107 4 Updated Nov 28, 2024
  • portal-ui Public

    HuBMAP Data Portal front end

    hubmapconsortium/portal-ui’s past year of commit activity
    TypeScript 12 MIT 2 200 28 Updated Nov 27, 2024
  • rna-data-products Public
    hubmapconsortium/rna-data-products’s past year of commit activity
    Python 0 GPL-3.0 0 3 0 Updated Nov 27, 2024
  • py-hubmap-dbgap Public

    Python package that creates a dbGaP submission from HuBMAP datasets

    hubmapconsortium/py-hubmap-dbgap’s past year of commit activity
    Jupyter Notebook 1 1 7 1 Updated Nov 27, 2024
  • ccf-validation-tools Public

    HRA ASCT+B Validation Reports

    hubmapconsortium/ccf-validation-tools’s past year of commit activity
    Python 6 Apache-2.0 1 4 3 Updated Nov 27, 2024
  • ingest-validation-tests Public
    hubmapconsortium/ingest-validation-tests’s past year of commit activity
    Python 0 0 4 2 Updated Nov 27, 2024
  • ingest-pipeline Public

    Data ingest pipeline(s) for QA/metadata etl/post-processing

    hubmapconsortium/ingest-pipeline’s past year of commit activity
    Python 4 MIT 5 79 19 Updated Nov 26, 2024
  • hra-registrations Public

    Manually curated HRA Dataset Graphs

    hubmapconsortium/hra-registrations’s past year of commit activity
    HTML 1 MIT 0 14 0 Updated Nov 26, 2024
  • kaggle-2-segmentation Public
    hubmapconsortium/kaggle-2-segmentation’s past year of commit activity
    Python 0 MIT 0 1 0 Updated Nov 26, 2024
  • sprm Public
    hubmapconsortium/sprm’s past year of commit activity
    Python 4 GPL-3.0 0 9 1 Updated Nov 26, 2024
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