chore : Use uv to resolve dependencies

api/CONTRIBUTING.md

@@ -45,16 +45,12 @@ tox
 # 1. add/remove packages from the requirements in setup.py
 
 # 2. compile dependencies
-pip-compile --output-file=requirements/requirements.txt && \
-    pip-compile --extra=dev --output-file=requirements/dev-requirements.txt && \
-    pip-compile --extra=test --output-file=requirements/test-requirements.txt
+
+make
 ```
 
 ### 2. Upgrading packages
 
 ```bash
-# 1. compile dependencies with the upgrade flag set
-pip-compile --upgrade --output-file=requirements/requirements.txt && \
-    pip-compile --upgrade --extra=dev --output-file=requirements/dev-requirements.txt && \
-    pip-compile --upgrade --extra=test --output-file=requirements/test-requirements.txt
+make upgrade all
 ```

api/Makefile

@@ -0,0 +1,23 @@
+UV_VERSION := 0.1.33
+
+PIP_COMPILE := pipx run uv pip compile setup.py --quiet
+
+ifeq ($(filter upgrade,$(MAKECMDGOALS)),upgrade)
+PIP_COMPILE += --upgrade
+endif
+
+.PHONY: all dev base test uv upgrade
+
+all: base dev test
+
+uv:
+	pip install uv==$(UV_VERSION)
+
+base: uv
+	$(PIP_COMPILE) --output-file=requirements/requirements.txt
+
+dev: uv
+	$(PIP_COMPILE) --extra=dev --output-file=requirements/dev-requirements.txt
+
+test: uv
+	$(PIP_COMPILE) --extra=test --output-file=requirements/test-requirements.txt

api/requirements/dev-requirements.txt

@@ -1,11 +1,6 @@
-#
-# This file is autogenerated by pip-compile with Python 3.11
-# by the following command:
-#
-#    pip-compile --extra=dev --output-file=requirements/dev-requirements.txt
-#
+# This file was autogenerated by uv via the following command:
+#    uv pip compile setup.py --extra=dev --output-file=requirements/dev-requirements.txt
 alembic==1.13.1
-    # via data-inclusion-api (setup.py)
 annotated-types==0.6.0
     # via pydantic
 anyio==4.3.0
@@ -26,7 +21,6 @@ cachetools==5.3.3
     # via tox
 certifi==2024.2.2
     # via
-    #   data-inclusion-api (setup.py)
     #   fiona
     #   httpcore
     #   httpx
@@ -48,7 +42,6 @@ click==8.1.7
     # via
     #   click-plugins
     #   cligj
-    #   data-inclusion-api (setup.py)
     #   fiona
     #   uvicorn
 click-plugins==1.1.1
@@ -58,60 +51,48 @@ cligj==0.7.2
 colorama==0.4.6
     # via tox
 cryptography==42.0.5
-    # via
-    #   data-inclusion-api (setup.py)
-    #   python-jose
+    # via python-jose
 data-inclusion-schema==0.14.0
-    # via data-inclusion-api (setup.py)
 distlib==0.3.8
     # via virtualenv
 dnspython==2.6.1
     # via email-validator
-ecdsa==0.18.0
+ecdsa==0.19.0
     # via python-jose
 email-validator==2.1.1
     # via pydantic
-faker==23.3.0
-    # via data-inclusion-api (setup.py)
-fastapi==0.110.0
+faker==24.11.0
+fastapi==0.110.2
     # via
-    #   data-inclusion-api (setup.py)
     #   fastapi-debug-toolbar
     #   fastapi-pagination
     #   sentry-sdk
 fastapi-debug-toolbar==0.6.2
-    # via data-inclusion-api (setup.py)
-fastapi-pagination==0.12.17
-    # via data-inclusion-api (setup.py)
-filelock==3.13.1
+fastapi-pagination==0.12.23
+filelock==3.13.4
     # via
     #   tox
     #   virtualenv
 fiona==1.9.6
     # via geopandas
 furl==2.1.3
-    # via data-inclusion-api (setup.py)
-geoalchemy2==0.14.6
-    # via data-inclusion-api (setup.py)
+geoalchemy2==0.14.7
 geopandas==0.14.3
-    # via data-inclusion-api (setup.py)
 greenlet==3.0.3
     # via sqlalchemy
-gunicorn==21.2.0
-    # via data-inclusion-api (setup.py)
+gunicorn==22.0.0
 h11==0.14.0
     # via
     #   httpcore
     #   uvicorn
-httpcore==1.0.4
+httpcore==1.0.5
     # via httpx
 httptools==0.6.1
     # via uvicorn
 httpx==0.27.0
-    # via data-inclusion-api (setup.py)
-identify==2.5.35
+identify==2.5.36
     # via pre-commit
-idna==3.6
+idna==3.7
     # via
     #   anyio
     #   email-validator
@@ -121,83 +102,71 @@ inflate64==1.0.0
     # via py7zr
 jinja2==3.1.3
     # via fastapi-debug-toolbar
-mako==1.3.2
+mako==1.3.3
     # via alembic
 markupsafe==2.1.5
     # via
     #   jinja2
     #   mako
 minio==7.2.5
-    # via data-inclusion-api (setup.py)
 multivolumefile==0.2.3
     # via py7zr
 nodeenv==1.8.0
     # via pre-commit
 numpy==1.26.4
     # via
-    #   data-inclusion-api (setup.py)
     #   pandas
     #   pyarrow
     #   shapely
 orderedmultidict==1.0.1
     # via furl
-packaging==23.2
+packaging==24.0
     # via
     #   geoalchemy2
     #   geopandas
     #   gunicorn
     #   pyproject-api
     #   tox
-pandas==2.2.1
-    # via
-    #   data-inclusion-api (setup.py)
-    #   geopandas
+pandas==2.2.2
+    # via geopandas
 platformdirs==4.2.0
     # via
     #   tox
     #   virtualenv
-pluggy==1.4.0
+pluggy==1.5.0
     # via tox
-pre-commit==3.6.2
-    # via data-inclusion-api (setup.py)
+pre-commit==3.7.0
 psutil==5.9.8
     # via py7zr
 psycopg2==2.9.9
-    # via data-inclusion-api (setup.py)
 py7zr==0.21.0
-    # via data-inclusion-api (setup.py)
-pyarrow==15.0.0
-    # via data-inclusion-api (setup.py)
-pyasn1==0.5.1
+pyarrow==16.0.0
+pyasn1==0.6.0
     # via
     #   python-jose
     #   rsa
 pybcj==1.0.2
     # via py7zr
-pycparser==2.21
+pycparser==2.22
     # via cffi
 pycryptodome==3.20.0
     # via minio
 pycryptodomex==3.20.0
     # via py7zr
-pydantic[email]==2.6.3
+pydantic==2.7.0
     # via
-    #   data-inclusion-api (setup.py)
     #   data-inclusion-schema
     #   fastapi
     #   fastapi-debug-toolbar
     #   fastapi-pagination
-    #   pydantic
     #   pydantic-extra-types
     #   pydantic-settings
-pydantic-core==2.16.3
+pydantic-core==2.18.1
     # via pydantic
 pydantic-extra-types==2.6.0
     # via fastapi-debug-toolbar
 pydantic-settings==2.2.1
-    # via
-    #   data-inclusion-api (setup.py)
-    #   fastapi-debug-toolbar
+    # via fastapi-debug-toolbar
 pyinstrument==4.6.2
     # via fastapi-debug-toolbar
 pyppmd==1.1.0
@@ -212,30 +181,25 @@ python-dateutil==2.9.0.post0
     #   pandas
 python-dotenv==1.0.1
     # via
-    #   data-inclusion-api (setup.py)
     #   pydantic-settings
     #   uvicorn
-python-jose[cryptography]==3.3.0
-    # via data-inclusion-api (setup.py)
+python-jose==3.3.0
 pytz==2024.1
-    # via
-    #   data-inclusion-api (setup.py)
-    #   pandas
+    # via pandas
 pyyaml==6.0.1
     # via
     #   pre-commit
     #   uvicorn
 pyzstd==0.15.10
     # via py7zr
 requests==2.31.0
-    # via data-inclusion-api (setup.py)
 rsa==4.9
     # via python-jose
-ruff==0.3.0
-    # via data-inclusion-api (setup.py)
-sentry-sdk[fastapi]==1.40.6
-    # via data-inclusion-api (setup.py)
-shapely==2.0.3
+ruff==0.4.1
+sentry-sdk==1.45.0
+setuptools==69.5.1
+    # via nodeenv
+shapely==2.0.4
     # via geopandas
 six==1.16.0
     # via
@@ -248,22 +212,19 @@ sniffio==1.3.1
     # via
     #   anyio
     #   httpx
-sqlalchemy==2.0.28
+sqlalchemy==2.0.29
     # via
     #   alembic
-    #   data-inclusion-api (setup.py)
     #   geoalchemy2
-sqlparse==0.4.4
+sqlparse==0.5.0
     # via fastapi-debug-toolbar
-starlette==0.36.3
+starlette==0.37.2
     # via fastapi
 texttable==1.7.0
     # via py7zr
-tox==4.13.0
-    # via data-inclusion-api (setup.py)
+tox==4.14.2
 tqdm==4.66.2
-    # via data-inclusion-api (setup.py)
-typing-extensions==4.10.0
+typing-extensions==4.11.0
     # via
     #   alembic
     #   fastapi
@@ -279,18 +240,15 @@ urllib3==2.2.1
     #   minio
     #   requests
     #   sentry-sdk
-uvicorn[standard]==0.27.1
-    # via data-inclusion-api (setup.py)
+uv==0.1.35
+uvicorn==0.29.0
 uvloop==0.19.0
     # via uvicorn
-virtualenv==20.25.1
+virtualenv==20.25.3
     # via
     #   pre-commit
     #   tox
 watchfiles==0.21.0
     # via uvicorn
 websockets==12.0
     # via uvicorn
-
-# The following packages are considered to be unsafe in a requirements file:
-# setuptools