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Add Single Cell and Spatial Omics shed categories #513

Add Single Cell and Spatial Omics shed categories

Add Single Cell and Spatial Omics shed categories #513

Triggered via pull request October 30, 2024 06:32
Status Failure
Total duration 1h 8m 41s
Artifacts 3

pr.yaml

on: pull_request
Matrix: Setup cache and determine changed repositories
Matrix: Lint tool-list
Matrix: Lint Python scripts
Matrix: Lint R scripts
Matrix: Test tools
Check file sizes
14s
Check file sizes
Matrix: Combine chunked test results
Matrix: Deploy
Check workflow success
4s
Check workflow success
Report deploy status
0s
Report deploy status
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Annotations

25 errors and 5 warnings
Test tools (3, 3.11)
Process completed with exit code 2.
Test tools (1, 3.11)
Process completed with exit code 2.
Test tools (0, 3.11)
Process completed with exit code 2.
Test tools (0, 3.11)
Process completed with exit code 2.
Test tools (0, 3.11)
Process completed with exit code 2.
Test tools (0, 3.11)
Process completed with exit code 2.
Test tools (2, 3.11)
Process completed with exit code 2.
Combine chunked test results (3.11)
Process completed with exit code 2.
Lint tool-list (3.11)
Process completed with exit code 1.
Lint Python scripts (3.11)
Process completed with exit code 123.
Lint Python scripts (3.11)
Process completed with exit code 123.
Lint Python scripts (3.11)
Process completed with exit code 123.
Lint Python scripts (3.11)
Process completed with exit code 123.
Check workflow success
Process completed with exit code 1.
Check workflow success
Process completed with exit code 1.
Check workflow success
Process completed with exit code 1.
Check workflow success
Process completed with exit code 1.
Lint R scripts (ubuntu-20.04, release)
Process completed with exit code 1.
Lint R scripts (ubuntu-20.04, release)
Process completed with exit code 1.
Lint R scripts (ubuntu-20.04, release)
Process completed with exit code 1.
Lint R scripts (ubuntu-20.04, release)
Process completed with exit code 1.
Test tools (0, 3.11)
Process completed with exit code 2.
Lint Python scripts (3.11)
Process completed with exit code 123.
Check workflow success
Process completed with exit code 1.
Lint R scripts (ubuntu-20.04, release)
Process completed with exit code 1.
Lint R scripts (ubuntu-20.04, release)
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
Lint R scripts (ubuntu-20.04, release)
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
Lint R scripts (ubuntu-20.04, release)
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
Lint R scripts (ubuntu-20.04, release)
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
Lint R scripts (ubuntu-20.04, release)
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.

Artifacts

Produced during runtime
Name Size
Python linting output
875 Bytes
R linting output
2.38 KB
Tool linting output
11.2 KB