Merge pull request #421 from broadinstitute/pangolin

bump pangolin docker
broadinstitute · May 18, 2022 · 7aafe3d · 7aafe3d
2 parents 39fa4f0 + f7f971a
commit 7aafe3d
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diff --git a/pipes/WDL/tasks/tasks_sarscov2.wdl b/pipes/WDL/tasks/tasks_sarscov2.wdl
@@ -10,7 +10,7 @@ task pangolin_one_sample {
         Float?  max_ambig
         String? analysis_mode
         Boolean update_dbs_now=false
-        String  docker = "quay.io/staphb/pangolin:4.0.6-pdata-1.8"
+        String  docker = "quay.io/staphb/pangolin:4.0.6-pdata-1.8-constellations-0.1.10"
     }
     String basename = basename(genome_fasta, ".fasta")
     command <<<
@@ -91,7 +91,7 @@ task pangolin_many_samples {
         String?      analysis_mode
         Boolean      update_dbs_now=false
         String       basename
-        String       docker = "quay.io/staphb/pangolin:4.0.6-pdata-1.8"
+        String       docker = "quay.io/staphb/pangolin:4.0.6-pdata-1.8-constellations-0.1.10"
     }
     command <<<
         set -ex

diff --git a/requirements-modules.txt b/requirements-modules.txt
@@ -7,5 +7,5 @@ broadinstitute/beast-beagle-cuda=1.10.5pre
 broadinstitute/ncbi-tools=2.10.7.10
 nextstrain/base=build-20211012T204409Z
 andersenlabapps/ivar=1.3.1
-quay.io/staphb/pangolin=4.0.6-pdata-1.8
+quay.io/staphb/pangolin=4.0.6-pdata-1.8-constellations-0.1.10
 nextstrain/nextclade=1.11.0