I use genomics to study the evolution and spread of human pathogens and lead analytics and methods dev in the Viral Genomics group at the Broad Institute.
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Broad Institute
- Cambridge, MA
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22:40
(UTC -05:00) - http://www.broadinstitute.org/bios/daniel-park
- https://orcid.org/0000-0001-7226-7781
- @DannyJPark
- @[email protected]
Pinned Loading
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broadinstitute/viral-pipelines
broadinstitute/viral-pipelines Publicviral-ngs: complete pipelines
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auspice-private-template
auspice-private-template PublicTemplate for spinning up an Auspice server with data sourced from a private github repo
Dockerfile 2
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broadinstitute/viral-assemble
broadinstitute/viral-assemble Publicviral-ngs: genome assembly and scaffolding
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broadinstitute/viral-classify
broadinstitute/viral-classify Publicviral-ngs: taxonomic identification, classification, and filtering steps
Python 2
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broadinstitute/viral-core
broadinstitute/viral-core Publicviral-ngs: read QC, barcode metrics, spike-in metrics, Illumina metrics and demux
Python 4
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broadinstitute/beast-beagle-cuda
broadinstitute/beast-beagle-cuda PublicBEAST+BEAGLE compiled with NVIDIA CUDA
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