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Update use of cellfinder.core download cli
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adamltyson committed May 7, 2024
1 parent 4700a23 commit b8c15b2
Showing 1 changed file with 2 additions and 6 deletions.
8 changes: 2 additions & 6 deletions brainglobe_workflows/brainmapper/parser.py
Original file line number Diff line number Diff line change
Expand Up @@ -18,10 +18,7 @@
)
from brainreg.core.cli import atlas_parse, geometry_parser, niftyreg_parse
from brainreg.core.cli import backend_parse as brainreg_backend_parse
from cellfinder.core.download.cli import (
download_directory_parser,
model_parser,
)
from cellfinder.core.download.cli import download_parser
from cellfinder.core.tools.source_files import user_specific_configuration_path

from brainglobe_workflows import __version__
Expand Down Expand Up @@ -65,9 +62,8 @@ def brainmapper_parser():
parser = classification_parse(parser)
parser = cube_extract_parse(parser)
parser = misc_parse(parser)
parser = model_parser(parser)
parser = figures_parse(parser)
parser = download_directory_parser(parser)
parser = download_parser(parser)

# brainreg options
parser = atlas_parse(parser)
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