Skip to content

Issues: brainglobe/brainglobe-workflows

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

24 Open 27 Closed
24 Open 27 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

Update the use of yml/yaml if needed enhancement New feature or request
#129 opened Oct 23, 2024 by adamltyson
[Feature] Create benchmarks for individual tools enhancement New feature or request
#126 opened Aug 8, 2024 by alessandrofelder
[Feature] Run asv with pip install -vvv for extra debugging info enhancement New feature or request
#125 opened Aug 8, 2024 by alessandrofelder
[Feature] A benchmark for classification on a large dataset enhancement New feature or request
#99 opened Apr 26, 2024 by alessandrofelder
1
[BUG] Output folder created before running benchmarks bug Something isn't working
#98 opened Apr 25, 2024 by sfmig
@sfmig
[Feature] run benchmarks on latest development branch of tools enhancement New feature or request
#75 opened Jan 8, 2024 by alessandrofelder
3
Add more brainmapper tests enhancement New feature or request
#70 opened Jan 4, 2024 by adamltyson
[Feature] Speed up the CI tests enhancement New feature or request
#65 opened Jan 3, 2024 by willGraham01
8
[Feature] Benchmark memory usage for cellfinding workflow (Python API) enhancement New feature or request
#59 opened Dec 14, 2023 by alessandrofelder
Detect dependency breaks [Feature] enhancement New feature or request
#57 opened Dec 14, 2023 by sfmig
@sfmig
1
Comparative benchmarks [Feature] enhancement New feature or request
#56 opened Dec 14, 2023 by sfmig
@sfmig
Avoid all-catch Exception enhancement New feature or request migrated-from-cellfinder For issues that were inherited from the migration of cellfinder into this package.
#40 opened Nov 13, 2023 by alessandrofelder
Move from logging to fancylog
#25 opened Oct 13, 2023 by alessandrofelder
@sfmig
1
Use pydantic instead of dataclasses to define configs? question Further information is requested
#22 opened Oct 4, 2023 by sfmig
Benchmarking functionalities that are not part of the main workflow question Further information is requested
#21 opened Oct 2, 2023 by sfmig
1
Agree on large data to be used for end-to-end tests question Further information is requested
#19 opened Sep 28, 2023 by alessandrofelder
@alessandrofelder
Create example script for access atlas data
#13 opened Sep 15, 2023 by alessandrofelder
1
Create example script for transforming data from sample to atlas space
#12 opened Sep 15, 2023 by alessandrofelder
Create example script for image registration
#11 opened Sep 15, 2023 by alessandrofelder
@alessandrofelder
1
[Feature] benchmark / smoke-test scripts: planning/structure enhancement New feature or request
#9 opened Sep 15, 2023 by alessandrofelder
@alessandrofelder @sfmig
10
Benchmarks in CI [Feature] enhancement New feature or request
#106 opened Jul 20, 2023 by sfmig
1
Provide better error messages in case of a single corrupt file enhancement New feature or request migrated-from-cellfinder For issues that were inherited from the migration of cellfinder into this package.
#43 opened Oct 10, 2022 by adamltyson
Allow for changing cube size enhancement New feature or request migrated-from-cellfinder For issues that were inherited from the migration of cellfinder into this package.
#45 opened Jul 19, 2022 by MysticElephant
[Feature] storing config files in local data/output directory instead of in conda env installation directory enhancement New feature or request migrated-from-cellfinder For issues that were inherited from the migration of cellfinder into this package.
#46 opened Mar 2, 2022 by jjtukker
1
ProTip! Add no:assignee to see everything that’s not assigned.