Merge pull request #23 from brainglobe/smg/cellfinder-workflow-cli-w-…

…tests Cellfinder workflow CLI input argument with tests
brainglobe · Oct 13, 2023 · 86754ed · 86754ed
2 parents fa48258 + f16c6b9
commit 86754ed
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Showing 8 changed files with 939 additions and 5 deletions.
diff --git a/MANIFEST.in b/MANIFEST.in
@@ -3,6 +3,7 @@ include README.md
 exclude .pre-commit-config.yaml
 
 recursive-include brainglobe_workflows *.py
+include brainglobe_workflows/cellfinder/default_config.json
 
 recursive-exclude * __pycache__
 recursive-exclude * *.py[co]

diff --git a/brainglobe_workflows/__init__.py b/brainglobe_workflows/__init__.py
@@ -1,7 +1,7 @@
 from importlib.metadata import PackageNotFoundError, version
 
 try:
-    __version__ = version("brainglobe-scripts")
+    __version__ = version("brainglobe-workflows")
 except PackageNotFoundError:
     # package is not installed
     pass
diff --git a/brainglobe_workflows/cellfinder/__init__.py b/brainglobe_workflows/cellfinder/__init__.py