aertslab pycisTopic General · Discussions · GitHub

Sparcity resulting in empty DataFrames in the markers_dict object
Q&A rkelly712

Sort by: Latest activity

Categories

Community guidelines

General Discussions

Chat about anything and everything here

You must be logged in to vote

how to subset cells on a pycisTopic object?

Melody-cell started Nov 18, 2024 in General

7
You must be logged in to vote

what's the principle of the integration of snATAC-seq and scRNA-seq data during label transfer step?

Melody-cell started Nov 22, 2024 in General

6
You must be logged in to vote

Why psuedobulk then QC

TingTingShao started Mar 20, 2024 in General

11
You must be logged in to vote

Conversion from snapatac2 to pycistopic

lf96abc started Aug 15, 2024 in General

0
You must be logged in to vote

Start from the count matrix tutorial no longer available

degrainger started May 21, 2024 in General · Closed

1
You must be logged in to vote

Issue when running run_cgs_models_mallet() prior to scenic+

laurajohanne started Mar 26, 2024 in General

3
You must be logged in to vote

normTop?

dagarfield started Oct 27, 2023 in General

3