Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

[radar-output] Allow config of scan intervals (needed for e2e testing) #305

Merged
merged 1 commit into from
Dec 19, 2024
Merged

[radar-output] Allow config of scan intervals (needed for e2e testing) #305

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
1 commit
Select commit
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
5 changes: 1 addition & 4 deletions charts/radar-output/Chart.yaml
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -2,7 +2,7 @@ apiVersion: v2
appVersion: "3.0.2"
description: A Helm chart for RADAR-base output restructure service. This application reads data from intermediate storage and restructure the data into project-> subject-id-> data topic -> data split per hour. This service offers few options to choose the source and target of the pipeline.
name: radar-output
version: 1.0.1
version: 1.1.0
icon: "http://radar-base.org/wp-content/uploads/2022/09/Logo_RADAR-Base-RGB.png"
sources:
- https://github.com/RADAR-base/radar-helm-charts/tree/main/charts/radar-output
Expand All @@ -21,6 +21,3 @@ maintainers:
- email: [email protected]
name: Pim van Nierop
url: https://www.thehyve.nl/experts/pim-van-nierop
- email: [email protected]
name: Nivethika Mahasivam
url: https://www.thehyve.nl/experts/nivethika-mahasivam
5 changes: 3 additions & 2 deletions charts/radar-output/README.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -3,7 +3,7 @@
# radar-output
[![Artifact HUB](https://img.shields.io/endpoint?url=https://artifacthub.io/badge/repository/radar-output)](https://artifacthub.io/packages/helm/radar-base/radar-output)

![Version: 1.0.1](https://img.shields.io/badge/Version-1.0.1-informational?style=flat-square) ![Type: application](https://img.shields.io/badge/Type-application-informational?style=flat-square) ![AppVersion: 3.0.2](https://img.shields.io/badge/AppVersion-3.0.2-informational?style=flat-square)
![Version: 1.1.0](https://img.shields.io/badge/Version-1.1.0-informational?style=flat-square) ![Type: application](https://img.shields.io/badge/Type-application-informational?style=flat-square) ![AppVersion: 3.0.2](https://img.shields.io/badge/AppVersion-3.0.2-informational?style=flat-square)

A Helm chart for RADAR-base output restructure service. This application reads data from intermediate storage and restructure the data into project-> subject-id-> data topic -> data split per hour. This service offers few options to choose the source and target of the pipeline.

Expand All @@ -15,7 +15,6 @@ A Helm chart for RADAR-base output restructure service. This application reads d
| ---- | ------ | --- |
| Keyvan Hedayati | <[email protected]> | <https://www.thehyve.nl> |
| Pim van Nierop | <[email protected]> | <https://www.thehyve.nl/experts/pim-van-nierop> |
| Nivethika Mahasivam | <[email protected]> | <https://www.thehyve.nl/experts/nivethika-mahasivam> |

## Source Code

Expand Down Expand Up @@ -68,6 +67,8 @@ A Helm chart for RADAR-base output restructure service. This application reads d
| source.azure.responseTimeout | string | `nil` | Azure HTTP response timeout in seconds |
| source.azure.writeTimeout | string | `nil` | Azure HTTP write timeout in seconds |
| source.azure.readTimeout | string | `nil` | Azure HTTP read timeout in seconds |
| source.index.fullSyncInterval | int | `3600` | Interval in seconds to synchronize the index with the storage (in seconds). This values should be only changed in specific scenarios (e.g. e2e testing). |
| source.index.emptyDirectorySyncInterval | int | `900` | Interval in seconds to also include empty directories during sync with the storage (in seconds). This values should be only changed in specific scenarios (e.g. e2e testing). |
| target.type | string | `"s3"` | Type of the output storage of the RADAR-base pipeline (e.g., s3 or azure) |
| target.s3.endpoint | string | `"http://minio:9000"` | s3 endpoint of the output storage |
| target.s3.accessToken | string | `"access_key"` | s3 access-key of the output storage |
Expand Down
3 changes: 3 additions & 0 deletions charts/radar-output/templates/configmap.yaml
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -43,6 +43,9 @@ data:
{{- if .azure.readTimeout }}
readTimeout: {{ .azure.readTimeout | int }}
{{- end }}
index:
fullSyncInterval: {{ .index.fullSyncInterval | int }}
emptyDirectorySyncInterval: {{ .index.emptyDirectorySyncInterval | int }}
{{- end }}

{{- with .Values.target }}
Expand Down
7 changes: 7 additions & 0 deletions charts/radar-output/values.yaml
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -149,6 +149,13 @@ source:
writeTimeout:
# -- Azure HTTP read timeout in seconds
readTimeout:
index:
# -- Interval in seconds to synchronize the index with the storage (in seconds).
# This values should be only changed in specific scenarios (e.g. e2e testing).
fullSyncInterval: 3600
# -- Interval in seconds to also include empty directories during sync with the storage (in seconds).
# This values should be only changed in specific scenarios (e.g. e2e testing).
emptyDirectorySyncInterval: 900

target:
# -- Type of the output storage of the RADAR-base pipeline (e.g., s3 or azure)
Expand Down
Loading