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Point mutation documenation/function #452

Point mutation documenation/function

Point mutation documenation/function #452

Triggered via pull request June 6, 2024 14:32
Status Failure
Total duration 21m 0s
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R-CMD-check.yaml

on: pull_request
Matrix: R-CMD-check
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26 errors and 18 warnings
macOS-latest (release)
No such keg: /opt/homebrew/Cellar/r
macOS-latest (release)
--- re-building ‘data-processing-vignette.Rmd’ using rmarkdown
macOS-latest (release)
processing vignette 'data-processing-vignette.Rmd' failed with diagnostics:
macOS-latest (release)
processing vignette 'genie-bpc-vignette.Rmd' failed with diagnostics:
macOS-latest (release)
Vignette re-building failed.
macOS-latest (release)
Build process failed
macOS-latest (release)
Process completed with exit code 1.
macOS-latest (release)
No such keg: /opt/homebrew/Cellar/r
ubuntu-latest (release)
--- re-building ‘data-processing-vignette.Rmd’ using rmarkdown
ubuntu-latest (release)
processing vignette 'data-processing-vignette.Rmd' failed with diagnostics:
ubuntu-latest (release)
processing vignette 'genie-bpc-vignette.Rmd' failed with diagnostics:
ubuntu-latest (release)
Vignette re-building failed.
ubuntu-latest (release)
Build process failed
ubuntu-latest (release)
Process completed with exit code 1.
ubuntu-latest (oldrel-1)
--- re-building ‘data-processing-vignette.Rmd’ using rmarkdown
ubuntu-latest (oldrel-1)
processing vignette 'data-processing-vignette.Rmd' failed with diagnostics:
ubuntu-latest (oldrel-1)
processing vignette 'genie-bpc-vignette.Rmd' failed with diagnostics:
ubuntu-latest (oldrel-1)
Vignette re-building failed.
ubuntu-latest (oldrel-1)
Build process failed
ubuntu-latest (oldrel-1)
Process completed with exit code 1.
ubuntu-latest (devel)
--- re-building ‘data-processing-vignette.Rmd’ using rmarkdown
ubuntu-latest (devel)
processing vignette 'data-processing-vignette.Rmd' failed with diagnostics:
ubuntu-latest (devel)
processing vignette 'genie-bpc-vignette.Rmd' failed with diagnostics:
ubuntu-latest (devel)
Vignette re-building failed.
ubuntu-latest (devel)
Build process failed
ubuntu-latest (devel)
Process completed with exit code 1.
macOS-latest (release)
qpdf 11.9.0 is already installed and up-to-date. To reinstall 11.9.0, run: brew reinstall qpdf
macOS-latest (release)
pkg-config 0.29.2_3 is already installed and up-to-date. To reinstall 0.29.2_3, run: brew reinstall pkg-config
macOS-latest (release)
checkbashisms 2.23.7 is already installed and up-to-date. To reinstall 2.23.7, run: brew reinstall checkbashisms
macOS-latest (release)
ghostscript 10.03.1 is already installed and up-to-date. To reinstall 10.03.1, run: brew reinstall ghostscript
macOS-latest (release)
No files were found with the provided path: /Users/runner/work/gnomeR/gnomeR/check. No artifacts will be uploaded.
macOS-latest (release)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
macOS-latest (release)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
macOS-latest (release)
pkg-config 0.29.2_3 is already installed and up-to-date. To reinstall 0.29.2_3, run: brew reinstall pkg-config
macOS-latest (release)
HOMEBREW_NO_INSTALLED_DEPENDENTS_CHECK is set: not checking for outdated dependents or dependents with broken linkage!
ubuntu-latest (release)
No files were found with the provided path: /home/runner/work/gnomeR/gnomeR/check. No artifacts will be uploaded.
ubuntu-latest (release)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
ubuntu-latest (release)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
ubuntu-latest (oldrel-1)
No files were found with the provided path: /home/runner/work/gnomeR/gnomeR/check. No artifacts will be uploaded.
ubuntu-latest (oldrel-1)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
ubuntu-latest (oldrel-1)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
ubuntu-latest (devel)
No files were found with the provided path: /home/runner/work/gnomeR/gnomeR/check. No artifacts will be uploaded.
ubuntu-latest (devel)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
ubuntu-latest (devel)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/