added check gha action #32 #7
awasynAnnotations
12 errors and 22 warnings
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windows-latest (auto)
R CMD check found WARNINGs
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windows-latest (auto)
Process completed with exit code 1.
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macOS-latest (auto)
Packages required but not available: 'biomartr', 'gggenes', 'rentrez'
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macOS-latest (auto)
R CMD check found ERRORs
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macOS-latest (auto)
Process completed with exit code 1.
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ubuntu-latest (auto)
Process completed with exit code 1.
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ubuntu-latest (auto)
[Workflow Telemetry] Unable to finish stat collector
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ubuntu-latest (auto)
[Workflow Telemetry] Error
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ubuntu-latest (auto)
Error: connect ECONNREFUSED 127.0.0.1:7777
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ubuntu-latest (auto)
[Workflow Telemetry] Unable to report stat collector result
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ubuntu-latest (auto)
[Workflow Telemetry] Error
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ubuntu-latest (auto)
Error: connect ECONNREFUSED 127.0.0.1:7777
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windows-latest (auto)
dependencies 'BiocVersion', 'BiocStyle' are not available
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windows-latest (auto)
unable to access index for repository https://www.bioconductor.org/packages/3.21/workflows/bin/windows/contrib/4.5:
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windows-latest (auto)
C:/Users/runneradmin/AppData/Local/Temp/RtmpCmgTSo/Rbuild1b74217c69/MolEvolvR/man/combineFiles.Rd:23: unknown macro '\t'
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windows-latest (auto)
C:/Users/runneradmin/AppData/Local/Temp/RtmpKgzSj1/R.INSTALL50c31fe680b/MolEvolvR/man/combineFiles.Rd:23: unknown macro '\t'
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windows-latest (auto)
C:/Users/runneradmin/AppData/Local/Temp/RtmpsJr1Ii/Rbuild7485e856a0c/MolEvolvR/man/combineFiles.Rd:23: unknown macro '\t'
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windows-latest (auto)
Namespaces in Imports field not imported from:
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windows-latest (auto)
prepare_Rd: ./man/combineFiles.Rd:23: unknown macro '\t'
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windows-latest (auto)
Missing link(s) in Rd file 'getIPRScanColTypes.Rd':
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windows-latest (auto)
D:/a/MolEvolvR/MolEvolvR/check/MolEvolvR.Rcheck/00_pkg_src/MolEvolvR/man/combineFiles.Rd:23: unknown macro '\t'
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windows-latest (auto)
Undocumented data sets:
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macOS-latest (auto)
unable to access index for repository https://cran.rstudio.com/bin/macosx/big-sur-arm64/contrib/4.5:
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macOS-latest (auto)
unable to access index for repository https://cran.rstudio.com/bin/macosx/big-sur-arm64/contrib/4.5:
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macOS-latest (auto)
harfbuzz 10.0.1_1 is already installed and up-to-date.
To reinstall 10.0.1_1, run:
brew reinstall harfbuzz
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macOS-latest (auto)
fribidi 1.0.16 is already installed and up-to-date.
To reinstall 1.0.16, run:
brew reinstall fribidi
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macOS-latest (auto)
macOS's Gatekeeper has been disabled for this Cask
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macOS-latest (auto)
dependencies ‘BiocVersion’, ‘BiocStyle’ are not available
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macOS-latest (auto)
unable to access index for repository https://cran.rstudio.com/bin/macosx/big-sur-arm64/contrib/4.5:
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macOS-latest (auto)
unable to access index for repository https://www.bioconductor.org/packages/3.21/workflows/bin/macosx/big-sur-arm64/contrib/4.5:
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macOS-latest (auto)
unable to access index for repository https://cran.rstudio.com/bin/macosx/big-sur-arm64/contrib/4.5:
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macOS-latest (auto)
Label 72 at (1) defined but not used [-Wunused-label]
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ubuntu-latest (auto)
The following actions use a deprecated Node.js version and will be forced to run on node20: runforesight/workflow-telemetry-action@v1, actions/cache@v3, actions/upload-artifact@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
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Deprecation notice: v1, v2, and v3 of the artifact actions
The following artifacts were uploaded using a version of actions/upload-artifact that is scheduled for deprecation: "Linux-biocversion-devel-r-auto-results", "macOS-biocversion-devel-r-auto-results", "Windows-biocversion-devel-r-auto-results".
Please update your workflow to use v4 of the artifact actions.
Learn more: https://github.blog/changelog/2024-04-16-deprecation-notice-v3-of-the-artifact-actions/
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Artifacts
Produced during runtime
| Name | Size | |
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Linux-biocversion-devel-r-auto-results
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1.29 MB |
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Windows-biocversion-devel-r-auto-results
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1.31 MB |
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macOS-biocversion-devel-r-auto-results
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676 KB |
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