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change root path from /species/ to species/ and salsa to yahs
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@Delphine-L
Delphine-L committed May 16, 2024
1 parent 5b4b682 commit e40682e
Showing 1 changed file with 12 additions and 12 deletions.
24 changes: 12 additions & 12 deletions workflows/VGP-assembly-v2/Export-WF8/Galaxy-Workflow-Export_WF8_Scaffolding_HiC.ga
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Original file line number Diff line number Diff line change
Expand Up @@ -1254,7 +1254,7 @@
"name": "Input parameter",
"outputs": [],
"position": {
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"left": 0,
"top": 1412.1079716128102
},
"tool_id": null,
Expand Down Expand Up @@ -1394,7 +1394,7 @@
"owner": "iuc",
"tool_shed": "toolshed.g2.bx.psu.edu"
},
"tool_state": "{\"components\": [{\"__index__\": 0, \"param_type\": {\"select_param_type\": \"text\", \"__current_case__\": 0, \"component_value\": \"/species/\"}}, {\"__index__\": 1, \"param_type\": {\"select_param_type\": \"text\", \"__current_case__\": 0, \"component_value\": {\"__class__\": \"ConnectedValue\"}}}, {\"__index__\": 2, \"param_type\": {\"select_param_type\": \"text\", \"__current_case__\": 0, \"component_value\": \"/\"}}, {\"__index__\": 3, \"param_type\": {\"select_param_type\": \"text\", \"__current_case__\": 0, \"component_value\": {\"__class__\": \"ConnectedValue\"}}}, {\"__index__\": 4, \"param_type\": {\"select_param_type\": \"text\", \"__current_case__\": 0, \"component_value\": \"/assembly_vgp_\"}}, {\"__index__\": 5, \"param_type\": {\"select_param_type\": \"text\", \"__current_case__\": 0, \"component_value\": {\"__class__\": \"ConnectedValue\"}}}, {\"__index__\": 6, \"param_type\": {\"select_param_type\": \"text\", \"__current_case__\": 0, \"component_value\": \"_2.0/\"}}], \"__page__\": null, \"__rerun_remap_job_id__\": null}",
"tool_state": "{\"components\": [{\"__index__\": 0, \"param_type\": {\"select_param_type\": \"text\", \"__current_case__\": 0, \"component_value\": \"species/\"}}, {\"__index__\": 1, \"param_type\": {\"select_param_type\": \"text\", \"__current_case__\": 0, \"component_value\": {\"__class__\": \"ConnectedValue\"}}}, {\"__index__\": 2, \"param_type\": {\"select_param_type\": \"text\", \"__current_case__\": 0, \"component_value\": \"/\"}}, {\"__index__\": 3, \"param_type\": {\"select_param_type\": \"text\", \"__current_case__\": 0, \"component_value\": {\"__class__\": \"ConnectedValue\"}}}, {\"__index__\": 4, \"param_type\": {\"select_param_type\": \"text\", \"__current_case__\": 0, \"component_value\": \"/assembly_vgp_\"}}, {\"__index__\": 5, \"param_type\": {\"select_param_type\": \"text\", \"__current_case__\": 0, \"component_value\": {\"__class__\": \"ConnectedValue\"}}}, {\"__index__\": 6, \"param_type\": {\"select_param_type\": \"text\", \"__current_case__\": 0, \"component_value\": \"_2.0/\"}}], \"__page__\": null, \"__rerun_remap_job_id__\": null}",
"tool_version": "0.1.1",
"type": "tool",
"uuid": "b86485d7-063e-4c28-ba5d-cfd34922cf28",
Expand Down Expand Up @@ -2957,7 +2957,7 @@
}
},
"inputs": [],
"label": "Salsa",
"label": "Yahs",
"name": "Compose text parameter value",
"outputs": [
{
Expand All @@ -2977,7 +2977,7 @@
},
"RenameDatasetActionout1": {
"action_arguments": {
"newname": "Salsa Path"
"newname": "Yahs Path"
},
"action_type": "RenameDatasetAction",
"output_name": "out1"
Expand All @@ -2990,16 +2990,16 @@
"owner": "iuc",
"tool_shed": "toolshed.g2.bx.psu.edu"
},
"tool_state": "{\"components\": [{\"__index__\": 0, \"param_type\": {\"select_param_type\": \"text\", \"__current_case__\": 0, \"component_value\": {\"__class__\": \"ConnectedValue\"}}}, {\"__index__\": 1, \"param_type\": {\"select_param_type\": \"text\", \"__current_case__\": 0, \"component_value\": \"salsa/\"}}, {\"__index__\": 2, \"param_type\": {\"select_param_type\": \"text\", \"__current_case__\": 0, \"component_value\": {\"__class__\": \"ConnectedValue\"}}}, {\"__index__\": 3, \"param_type\": {\"select_param_type\": \"text\", \"__current_case__\": 0, \"component_value\": \"_\"}}], \"__page__\": null, \"__rerun_remap_job_id__\": null}",
"tool_state": "{\"components\": [{\"__index__\": 0, \"param_type\": {\"select_param_type\": \"text\", \"__current_case__\": 0, \"component_value\": {\"__class__\": \"ConnectedValue\"}}}, {\"__index__\": 1, \"param_type\": {\"select_param_type\": \"text\", \"__current_case__\": 0, \"component_value\": \"yahs/\"}}, {\"__index__\": 2, \"param_type\": {\"select_param_type\": \"text\", \"__current_case__\": 0, \"component_value\": {\"__class__\": \"ConnectedValue\"}}}, {\"__index__\": 3, \"param_type\": {\"select_param_type\": \"text\", \"__current_case__\": 0, \"component_value\": \"_\"}}], \"__page__\": null, \"__rerun_remap_job_id__\": null}",
"tool_version": "0.1.1",
"type": "tool",
"uuid": "eab68aa2-01eb-45bc-87a4-9c7e8e7e6577",
"when": null,
"workflow_outputs": [
{
"label": "Salsa Path",
"label": "Yahs Path",
"output_name": "out1",
"uuid": "11deb798-17f2-4dce-a4d8-cd878961debf"
"uuid": "5e7502a5-c203-46ea-b3f7-066a685de1f1"
}
]
},
Expand Down Expand Up @@ -3133,7 +3133,7 @@
}
},
"tags": "",
"uuid": "f6cb26b6-4417-4526-bafd-0114ecca435c"
"uuid": "8ccd0f59-b9ac-45df-9bd6-2e4d63a6d236"
},
"tool_id": null,
"type": "subworkflow",
Expand Down Expand Up @@ -3366,7 +3366,7 @@
"input_connections": {
"components_0|param_type|component_value": {
"id": 24,
"output_name": "Salsa Path"
"output_name": "Yahs Path"
},
"components_1|param_type|component_value": {
"id": 20,
Expand Down Expand Up @@ -3758,7 +3758,7 @@
"input_connections": {
"components_0|param_type|component_value": {
"id": 24,
"output_name": "Salsa Path"
"output_name": "Yahs Path"
}
},
"inputs": [],
Expand Down Expand Up @@ -4024,6 +4024,6 @@
}
},
"tags": [],
"uuid": "efcca7e6-4d16-4fbb-aa34-438ecfb1699e",
"version": 10
"uuid": "5ae7f06a-5554-4ed4-98f1-e27f63e32bd3",
"version": 7
}

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