CU-8695vnd6h Update to MedCAT 1.13 #105

	name: build

	on:
	push:
	branches: [ main ]
	pull_request:
	branches: [ main ]

	jobs:
	main:

	runs-on: macos-12
	strategy:
	matrix:
	part: [
	introductory/Part_2_*.ipynb,
	introductory/Part_3_*.ipynb,
	introductory/Part_4_*.ipynb,
	introductory/Part_5_*.ipynb,
	introductory/Part_1_*.ipynb,
	specialised/Comparing_Models_with_RegressionSuite.ipynb # this should work still
	# specialised/*.ipynb # To make it run, the SnomedCT file needs to be mocked
	]

	steps:
	- uses: actions/checkout@v4
	- name: Setup Python
	uses: actions/setup-python@v5
	with:
	python-version: "3.8"
	- name: Install dependencies
	run: \|
	pip install -U pip
	pip install -r requirements-dev.txt
	- name: Install IPython kernel
	run: \|
	python -m ipykernel install --name smoketests
	- name: Smoke test tutorial
	run: \|
	pytest --collect-only --nbmake ./notebooks/${{ matrix.part }}
	pytest --nbmake -n=auto --nbmake-kernel=smoketests --nbmake-timeout=1800 ./notebooks/${{ matrix.part }}

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