DeepNCSPP

DeepNCSPP: A non-classical secreted protein prediction model based on deep learning

Requirements

Python==3.8.16
Pytorch-GPU==2.0.0
Numpy==1.24.3
cuda version 11.7
cudnn version 8.0
conda install pytorch==2.0.0 torchvision==0.15.0 torchaudio==2.0.0 pytorch-cuda=11.7 -c pytorch -c nvidia

train and cross validation

python train.py

train and test

python train_test.py

demo

To facilitate testing, we put a trained weight parameter file in the demo folder demo/model.params
python demo.py

Note

If you want to train and get the same experimental results, please use the same operating system Windows 10,RTX 3060 graphics card and packages in requirements