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Make it possible to use custom g++ (#78)
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Signed-off-by: Martin Tzvetanov Grigorov <[email protected]>
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martin-g authored Dec 20, 2024
1 parent b1ca533 commit 0b66d35
Showing 1 changed file with 7 additions and 5 deletions.
12 changes: 7 additions & 5 deletions makefile
Original file line number Diff line number Diff line change
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CXX?=g++

mcscanx: struct.cc mcscan.cc read_data.cc out_utils.cc dagchainer.cc msa.cc permutation.cc
g++ struct.cc mcscan.cc read_data.cc out_utils.cc dagchainer.cc msa.cc permutation.cc -o MCScanX
g++ struct.cc mcscan_h.cc read_homology.cc out_homology.cc dagchainer.cc msa.cc permutation.cc -o MCScanX_h
g++ struct.cc dup_classifier.cc read_data.cc out_utils.cc dagchainer.cc cls.cc permutation.cc -o duplicate_gene_classifier
g++ dissect_multiple_alignment.cc -o downstream_analyses/dissect_multiple_alignment
g++ detect_collinear_tandem_arrays.cc -o downstream_analyses/detect_collinear_tandem_arrays
$(CXX) struct.cc mcscan.cc read_data.cc out_utils.cc dagchainer.cc msa.cc permutation.cc -o MCScanX
$(CXX) struct.cc mcscan_h.cc read_homology.cc out_homology.cc dagchainer.cc msa.cc permutation.cc -o MCScanX_h
$(CXX) struct.cc dup_classifier.cc read_data.cc out_utils.cc dagchainer.cc cls.cc permutation.cc -o duplicate_gene_classifier
$(CXX) dissect_multiple_alignment.cc -o downstream_analyses/dissect_multiple_alignment
$(CXX) detect_collinear_tandem_arrays.cc -o downstream_analyses/detect_collinear_tandem_arrays
cd downstream_analyses/ && ${MAKE}

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