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Merge pull request #829 from mgcam/update_changes_list
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Created a log of changes for release 68.0.0
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jmtcsngr authored Feb 21, 2024
2 parents 680fbb2 + c0e09b7 commit 3c41a1c
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LIST OF CHANGES
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release 68.0.0
- Use st::api::lims->aggregate_libraries() method for both 'merge_lanes' and
'merge_by_library' pipeline options. This is a breaking change as far as
archival and deletion of NovaSeq Standard workflow data is concerned.
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different to the more general merging across lanes where the (claimed) same
library has been sequenced. But this is not a valid reason to maintain separate
code.
- Deletable shadow folders are detected, but not considered as deletable
for now. They are flagged in the log of the 'npg_run_is_deletable' script.
- Removed all code that was used for the UKB project and the upload of Heron
project data to CLIMB. Updated the archival pipeline function graph and its
graphical representation.
- Removed 'cache_merge_component' and 'archive_to_s3' pipeline functions.
- Removed all functions for retrieving the QC state of the product
from 'npg_pipeline::product'.
- Dropped npg_pipeline::base dependency on QC database ('qc_schema'
attribute for 'npg_qc::Schema'). Removed test fixtures for the QC database.
- Deleted 'npg_receipt4run_is_deletable' script.
- Dropped checks for files upload to the third-party cloud locations when
deciding whether the run folder is deletable.
- Updated examples in POD in 'npg_pipeline::product::release'.
- Excluded redundant settings from 'product_release.yml' files used in
unit tests.

release 67.1.1
- Fixed correct pp collection root for MiSeq
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