fix: docker/Dockerfile to reduce vulnerabilities #14
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
name: "Lint and test-build Dockerfile" | |
on: | |
push: | |
branches: | |
- '**' | |
jobs: | |
lint-docker: | |
runs-on: ubuntu-latest | |
continue-on-error: true | |
defaults: | |
run: | |
shell: "bash -l -e -o pipefail {0}" | |
steps: | |
- name: "Checkout code" | |
uses: actions/checkout@v3 | |
with: | |
fetch-depth: 0 | |
- name: "Lint Dockerfile" | |
run: | | |
cat <<EOT >> .hadolint.yaml | |
ignored: | |
- DL3008 | |
EOT | |
docker run --rm -i -v /"${PWD}"/.hadolint.yaml:/.config/hadolint.yaml ghcr.io/hadolint/hadolint < docker/Dockerfile | |
build-docker: | |
runs-on: ubuntu-latest | |
defaults: | |
run: | |
shell: "bash -l -e -o pipefail {0}" | |
steps: | |
- name: "Checkout code" | |
uses: actions/checkout@v3 | |
with: | |
fetch-depth: 0 | |
- name: "Docker build" | |
run: | | |
set -x | |
docker build --rm \ | |
--file docker/Dockerfile \ | |
--build-arg HTSLIB_BRANCH=1.18 \ | |
--tag bambi . | |
docker run bambi bambi --version |