Updated trusted tools (2024-10-05)

usegalaxy-eu · Oct 5, 2024 · e54ab09 · e54ab09
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diff --git a/bgruening.yaml.lock b/bgruening.yaml.lock
@@ -257,6 +257,7 @@ tools:
 - name: jbrowse2
   owner: fubar
   revisions:
+  - 137e08517410
   - 2fff478aca4b
   - 4aec47f872b3
   - 56f9a6e0fe80

diff --git a/climate.yaml.lock b/climate.yaml.lock
@@ -16,6 +16,7 @@ tools:
   owner: climate
   revisions:
   - 706666d912d5
+  - 988212a7466a
   - db8d76da4174
   - e6d1e9d6b399
   tool_panel_section_label: Climate Analysis
@@ -216,13 +217,15 @@ tools:
   - 7e616a1bdb07
   - 7f2ef7216cf8
   - 90928b255abb
+  - ae344ccf9d62
   - b1268b7544d3
   - fcb6a19960c6
   tool_panel_section_label: Graph/Display Data
 - name: ggplot2_heatmap
   owner: iuc
   revisions:
   - 10515715c940
+  - 1a72f938213e
   - 391a4cc45fea
   - 3d059e9c2fba
   - a4d83ba2a1bc
@@ -234,6 +237,7 @@ tools:
   owner: iuc
   revisions:
   - 0e7290688b50
+  - 17b666467c32
   - 637cf21db396
   - 9c52a8130729
   - d6c41b454cc1
@@ -255,6 +259,7 @@ tools:
   - 1acf88921176
   - 299307abd804
   - 3b12bf9b4b87
+  - 5298e06f14f9
   - 5fe1dc76176e
   - 87908c76ca8d
   - 9cec81e1b90e
@@ -270,6 +275,7 @@ tools:
   - 398e5104f8a2
   - 497d700a5229
   - 536078949ae4
+  - 6fc8bab811da
   - b0d96516e6a5
   - fb50ab943396
   tool_panel_section_label: Graph/Display Data
diff --git a/ecology.yaml.lock b/ecology.yaml.lock
@@ -495,6 +495,7 @@ tools:
   - 7e616a1bdb07
   - 7f2ef7216cf8
   - 90928b255abb
+  - ae344ccf9d62
   - b1268b7544d3
   - fcb6a19960c6
   tool_panel_section_label: Graph/Display Data
@@ -521,6 +522,7 @@ tools:
   owner: iuc
   revisions:
   - 10515715c940
+  - 1a72f938213e
   - 391a4cc45fea
   - 3d059e9c2fba
   - a4d83ba2a1bc
@@ -532,6 +534,7 @@ tools:
   owner: iuc
   revisions:
   - 0e7290688b50
+  - 17b666467c32
   - 637cf21db396
   - 9c52a8130729
   - d6c41b454cc1
@@ -553,6 +556,7 @@ tools:
   - 1acf88921176
   - 299307abd804
   - 3b12bf9b4b87
+  - 5298e06f14f9
   - 5fe1dc76176e
   - 87908c76ca8d
   - 9cec81e1b90e
@@ -568,6 +572,7 @@ tools:
   - 398e5104f8a2
   - 497d700a5229
   - 536078949ae4
+  - 6fc8bab811da
   - b0d96516e6a5
   - fb50ab943396
   tool_panel_section_label: Graph/Display Data
@@ -891,6 +896,7 @@ tools:
   revisions:
   - 47e5dbc3e790
   - 71e5fa25b8a2
+  - e9f8633db0a2
   tool_panel_section_label: FASTA/FASTQ
 - name: fastqc
   owner: devteam
@@ -928,6 +934,7 @@ tools:
   owner: devteam
   revisions:
   - 56389130cb63
+  - 9115b978ce10
   - f1dc2a761c30
   tool_panel_section_label: FASTA/FASTQ
 - name: xarray_metadata_info

diff --git a/europe-custom.yaml.lock b/europe-custom.yaml.lock
@@ -705,6 +705,7 @@ tools:
 - name: khmer_filter_abundance
   owner: iuc
   revisions:
+  - 29a4d6e2ae9c
   - 8c6433857aa8
   - 97f65399e30d
   - a4970dfc331c
@@ -714,6 +715,7 @@ tools:
 - name: khmer_filter_below_abundance_cutoff
   owner: iuc
   revisions:
+  - 00f7064c564b
   - 19607c740d19
   - 569001af897d
   - b469ab47b490
@@ -723,6 +725,7 @@ tools:
 - name: khmer_extract_partitions
   owner: iuc
   revisions:
+  - 1061711538c6
   - 2c763fb18010
   - 518ba4a77274
   - 7d8138b4a593
@@ -737,11 +740,13 @@ tools:
   - a02efb62565b
   - c0caca5af183
   - e0de12ae3fc2
+  - e699e2747356
   tool_panel_section_label: Metagenomic Analysis
 - name: khmer_count_median
   owner: iuc
   revisions:
   - 06d1d91c67e5
+  - 570505540a7b
   - 5efc5f21d0c1
   - 77410799e8e9
   - 7aa811aa3b93
@@ -752,13 +757,15 @@ tools:
   revisions:
   - 5a0fa29951ae
   - 766ec3dad7ff
+  - 8388fe31d604
   - b7429b53be2a
   - c393687bd857
   - e562293ee5ec
   tool_panel_section_label: Metagenomic Analysis
 - name: khmer_normalize_by_median
   owner: iuc
   revisions:
+  - 4d23ab83ea29
   - 557cc16931f4
   - b1fe2ef3d244
   - bfd859f04a89
@@ -771,6 +778,7 @@ tools:
   - 09c6a051c5fd
   - 385a965c6f87
   - 55109291a355
+  - 65b382bf9b7c
   - 792d520ba676
   - c018a72b523e
   tool_panel_section_label: Metagenomic Analysis

diff --git a/genome-annotation.yaml.lock b/genome-annotation.yaml.lock
@@ -122,6 +122,7 @@ tools:
   revisions:
   - 09855551d713
   - 28433faa6e42
+  - bd0e53f3a891
   - ca6d970d931c
   - f5075dee9d6b
   tool_panel_section_label: Annotation
@@ -133,6 +134,7 @@ tools:
   - 7be22100e5e1
   - 86c89c3bd99d
   - dc027fa56d55
+  - f1e653756174
   tool_panel_section_label: Annotation
 - name: fasta_stats
   owner: simon-gladman

diff --git a/single-cell-ebi-gxa.yaml.lock b/single-cell-ebi-gxa.yaml.lock
@@ -1083,6 +1083,7 @@ tools:
   - 24013bf85a6f
   - 276b4111b253
   - 70cb5527defb
+  - 71ad4a56c40c
   - 8250ea3a1501
   - 933220bbc2ae
   - 9570563fb686
@@ -1162,6 +1163,7 @@ tools:
   - 93f61ea19336
   - bd4b54b75888
   - f321c60167d4
+  - f6040492b499
   tool_panel_section_id: hca_sc_label_analysis_tools
 - name: garnett_check_markers
   owner: ebi-gxa