Optimize czech pulsar configuration

[martindemko]

No description provided.

[martindemko]

Maybe I got it wrong, but how is it different from the cache_directory parameter in container_resolvers in galaxy.yml? Cause there it needs to be in order to look for images in CVMFS instead of the biocontainers.

[sanjaysrikakulam]

Right, sorry for the confusion. You are correct; we indeed configure Galaxy to use the CVMFS for cached_mulled_singularity cache_directory in the container resolvers conf.

[sanjaysrikakulam]

Let's give this a try.

[martindemko]

Thanks ;)

[martindemko]

So, I think, there is something wrong. At least the alfofold says:
Unbale to run job due to a misconfiguration of Galaxy job running system

[martindemko]

I wonder, are changes already deployed?

[sanjaysrikakulam]

I deployed the changes so you can test them and got lost in work.

[sanjaysrikakulam]

The reason was that the

 Mapped job to destination id: pulsar_cz02_tpv
Invalid job runner: pulsar_eu_cz02

Please check your user preferences. Maybe it is still pointing to the destination that you removed. Can you please submit a PR that removes the cz02 completely from destinations, and user_preferences_extra_conf.yml

[martindemko]

I have found it, thanks for your help, it helped a lot. Submiting new PR