Merge pull request #1202 from usegalaxy-eu/alphafold-gpu

never trust the linter
usegalaxy-eu · May 13, 2024 · 6294aa7 · 6294aa7
2 parents ad31ecd + 07507e7
commit 6294aa7
Showing 1 changed file with 4 additions and 2 deletions.
diff --git a/files/galaxy/tpv/tools.yml b/files/galaxy/tpv/tools.yml
@@ -287,8 +287,10 @@ tools:
         execute: |
           from random import SystemRandom
           if SystemRandom().random() < 0.10:
-              entity.gpus = 1
-              entity.params['singularity_run_extra_arguments'] = '--env ALPHAFOLD_DB=/data/db/databases/alphafold_databases,ALPHAFOLD_USE_GPU=True'
+            entity.gpus = 1
+            entity.params['singularity_run_extra_arguments'] = '--env ALPHAFOLD_DB=/data/db/databases/alphafold_databases,ALPHAFOLD_USE_GPU=True'
+          else:
+            entity.params['singularity_run_extra_arguments'] = '--env ALPHAFOLD_DB=/data/db/databases/alphafold_databases,ALPHAFOLD_USE_GPU=False'
         # tweak amount of requested memory depending on the AlphaFold model to be run
       - id: model_preset_multimer
         if: job.get_param_values(app).get("model_preset") == "multimer"