TPV: add host tmp file system to funannotate_predict as env

addresses user bug report "OSError: [Errno 16] Device or resource busy: .nfs000000000125e40200103e69'"
usegalaxy-eu · Jul 30, 2024 · 4ae0dbd · 4ae0dbd
1 parent 0b6084f
commit 4ae0dbd
Showing 1 changed file with 1 addition and 0 deletions.
diff --git a/files/galaxy/tpv/tools.yml b/files/galaxy/tpv/tools.yml
@@ -1333,6 +1333,7 @@ tools:
     mem: 12
     env:
       GENEMARK_PATH: /usr/local/tools/genemark/etp.for_braker/bin/gmes/
+      _GALAXY_JOB_TMP_DIR: '/tmp'
     params:
       singularity_run_extra_arguments: "--env GENEMARK_PATH=/usr/local/tools/genemark/etp.for_braker/bin/gmes/"
     scheduling: