Update tools.yml

files/galaxy/tpv/tools.yml

@@ -1027,14 +1027,14 @@ tools:
       accept:
         - pulsar
     rules:
-    - id: unicycler_small_input_rule
-      if: input_size < 0.05
-      cores: 1
-      mem: 3.8
-    - id: unicycler_medium_input_rule
-      if: 0.05 <= input_size < 2
-      cores: 8
-      mem: 28
+      - id: unicycler_small_input_rule
+        if: input_size < 0.05
+        cores: 1
+        mem: 3.8
+      - id: unicycler_medium_input_rule
+        if: 0.05 <= input_size < 2
+        cores: 8
+        mem: 28
 
   toolshed.g2.bx.psu.edu/repos/imgteam/unzip/unzip/.*:
     scheduling:
@@ -1188,30 +1188,30 @@ tools:
     cores: 32
     mem: 244
     rules:
-    - id: bwa_mem2_small_input_rule
-      if: input_size < 0.25
-      cores: 2
-      mem: 7.6
-    - id: bwa_mem2_medium_input_rule
-      if: 0.25 <= input_size < 16
-      cores: 8
-      mem: 28
-    - id: bwa_mem2_large_input_rule
-      if: 16 <= input_size < 32
-      cores: 16
-      mem: 58
-    - id: bwa_mem2_xlarge_input_rule
-      if: 32 <= input_size < 64
-      cores: 24
-      mem: 120
-    - id: bwa_mem2_history_reference_rule
-      if: |
-        helpers.job_args_match(job, app, {"reference_source": {"reference_source_selector": "history"}})
-      # per https://github.com/bwa-mem2/bwa-mem2/issues/41 it's 28 * reference
-      mem: |
-        options = job.get_param_values(app)
-        size = options["reference_source"]["ref_file"].get_size()
-        min(max(float(size/1024**3) * 28, (input_size - float(size/1024**3)) * 2, 7.6), 120)
+      - id: bwa_mem2_small_input_rule
+        if: input_size < 0.25
+        cores: 2
+        mem: 7.6
+      - id: bwa_mem2_medium_input_rule
+        if: 0.25 <= input_size < 16
+        cores: 8
+        mem: 28
+      - id: bwa_mem2_large_input_rule
+        if: 16 <= input_size < 32
+        cores: 16
+        mem: 58
+      - id: bwa_mem2_xlarge_input_rule
+        if: 32 <= input_size < 64
+        cores: 24
+        mem: 120
+      - id: bwa_mem2_history_reference_rule
+        if: |
+          helpers.job_args_match(job, app, {"reference_source": {"reference_source_selector": "history"}})
+        # per https://github.com/bwa-mem2/bwa-mem2/issues/41 it's 28 * reference
+        mem: |
+          options = job.get_param_values(app)
+          size = options["reference_source"]["ref_file"].get_size()
+          min(max(float(size/1024**3) * 28, (input_size - float(size/1024**3)) * 2, 7.6), 120)
 
   toolshed.g2.bx.psu.edu/repos/bgruening/flye/flye/.*:
     cores: 20