Update destinations.yml.j2

fixes path for Alphafold DB version 2.2
usegalaxy-eu · Oct 2, 2023 · 1f9dc5b · 1f9dc5b
1 parent 3b7b5b0
commit 1f9dc5b
Showing 1 changed file with 1 addition and 3 deletions.
diff --git a/files/galaxy/tpv/destinations.yml.j2 b/files/galaxy/tpv/destinations.yml.j2
@@ -286,9 +286,7 @@ destinations:
       - if: tool.id.startswith("toolshed.g2.bx.psu.edu/repos/galaxy-australia/alphafold2/alphafold") and helpers.tool_version_gte(tool, "2.1.2+galaxy0") and helpers.tool_version_lt(tool, "2.3")
         env:
           ALPHAFOLD_DB: "/storage/brno11-elixir/projects/alphafold/alphafold.db-2.2"
-        params:
-          singularity_volumes: "$job_directory:ro,$tool_directory:ro,$job_directory/outputs:rw,$working_directory:rw,/cvmfs/data.galaxyproject.org:ro,$SCRATCHDIR,/storage/praha5-elixir/home/galaxyeu:/home/galaxyeu,$ALPHAFOLD_DB:/data/db/databases/alphafold_databases/2.2:ro"
-      - if: tool.id.startswith("toolshed.g2.bx.psu.edu/repos/galaxy-australia/alphafold2/alphafold") and helpers.tool_version_gte(tool, "2.3")
+      - if: tool.id.startswith("toolshed.g2.bx.psu.edu/repos/galaxy-australia/alphafold2/alphafold") and helpers.tool_version_gte(tool, "2.3.1+galaxy2")
         params:
           singularity_volumes: "$job_directory:ro,$tool_directory:ro,$job_directory/outputs:rw,$working_directory:rw,/cvmfs/data.galaxyproject.org:ro,$SCRATCHDIR,/storage/praha5-elixir/home/galaxyeu:/home/galaxyeu,$ALPHAFOLD_DB:/data/2.3:ro"