Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

update alphafold gpu module section #148

Merged
merged 2 commits into from
Dec 14, 2023
Merged

update alphafold gpu module section #148

Changes from all commits
Commits
Show all changes
2 commits
Select commit Hold shift + click to select a range
dff7ef1
update alphafold gpu module section
nd996 Dec 14, 2023
b3575a5
fix typo
nd996 Dec 14, 2023
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
3 changes: 3 additions & 0 deletions docs/source/applications/alphafold.rst
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -58,6 +58,9 @@ Example job scripts
# Run AlphaFold
alphafold --fasta_paths=T1050.fasta --max_template_date=2020-05-14 --preset=full_dbs --output_dir=$PWD --model_names=model_1,model_2,model_3,model_4,model_5

.. important::
The CUDA enabled GPU module will only work on the ``gpu`` or ``gpu_week`` partitions with the nVidia A40 GPUs, it won't work on the ``gpu_plus`` partition with the H100 GPUs as they require CUDA 11.8

.. code-block:: bash
:caption: using a GPU in addition to 10 CPUs for up to 4 hours

Expand Down