Retry manylinux wheel building

ukhsa-collaboration · Aug 3, 2024 · bb39b98 · bb39b98
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commit bb39b98
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diff --git a/.github/workflows/main.yml b/.github/workflows/main.yml
@@ -67,34 +67,34 @@ jobs:
       - name: Run tests
         run: python -m unittest discover --start-directory tests
 
-#  build_wheels:
-#    name: Build wheels on ${{ matrix.os }}
-#    runs-on: ${{ matrix.os }}
-#    strategy:
-#      matrix:
-#        os: [windows-latest]  #ubuntu-latest#, macos-13, macos-14]
-#
-#    steps:
-#      - uses: actions/checkout@v4
-#
-#      - name: Install dependencies
-#        run: |
-#          python -m pip install --upgrade pip
-#          pip install -r requirements.txt
-#
-#      # Used to host cibuildwheel
-#      - uses: actions/setup-python@v5
-#
-#      - name: Install cibuildwheel
-#        run: python -m pip install cibuildwheel==2.19.2
-#
-#      - name: Build wheels
-#        run: python -m cibuildwheel --output-dir wheelhouse
-#        # to supply options, put them in 'env', like:
-#        # env:
-#        #   CIBW_SOME_OPTION: value
-#
-#      - uses: actions/upload-artifact@v4
-#        with:
-#          name: cibw-wheels-${{ matrix.os }}-${{ strategy.job-index }}
-#          path: ./wheelhouse/*.whl
+  build_wheels:
+    name: Build wheels on ${{ matrix.os }}
+    runs-on: ${{ matrix.os }}
+    strategy:
+      matrix:
+        os: [ubuntu-latest] #windows-latest], macos-13, macos-14]
+
+    steps:
+      - uses: actions/checkout@v4
+
+      - name: Install dependencies
+        run: |
+          python -m pip install --upgrade pip
+          pip install -r requirements.txt
+
+      # Used to host cibuildwheel
+      - uses: actions/setup-python@v5
+
+      - name: Install cibuildwheel
+        run: python -m pip install cibuildwheel==2.19.2
+
+      - name: Build wheels
+        run: python -m cibuildwheel --output-dir wheelhouse
+        # to supply options, put them in 'env', like:
+        # env:
+        #   CIBW_SOME_OPTION: value
+
+      - uses: actions/upload-artifact@v4
+        with:
+          name: cibw-wheels-${{ matrix.os }}-${{ strategy.job-index }}
+          path: ./wheelhouse/*.whl
diff --git a/pyproject.toml b/pyproject.toml
@@ -61,6 +61,12 @@ Issues = "https://github.com/ukhsa-collaboration/pygom/issues"
 # Normal options, etc.
 manylinux-x86_64-image = "manylinux2014"
 
+# Install blas & lapack on x86_64
+[tool.cibuildwheel.linux]
+before-all = "yum -y update && yum -y install blas-devel lapack-devel"
+before-test = "yum -y update && yum -y install openblas-devel lapack"
+
+
 [[tool.cibuildwheel.overrides]]
 select = "cp3{8,9}-*"
 manylinux-x86_64-image = "manylinux2010"