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Update MOM6 #175

Merged
merged 313 commits into from
Sep 9, 2020
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Commits on Mar 29, 2020

  1. update CICE submodule

    DeniseWorthen committed Mar 29, 2020
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Commits on Mar 30, 2020

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Commits on Mar 31, 2020

  1. update CMEPS, MOM6

    DeniseWorthen committed Mar 31, 2020
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Commits on Apr 2, 2020

  1. update NEMS

    DeniseWorthen committed Apr 2, 2020
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  4. update FV3, NEMS, compsets, conf, modulefiles and

    parm to get closer to ufs-s2s after ccpp was added
    DeniseWorthen committed Apr 2, 2020
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  5. Merge pull request #19 from ufs-community/develop

    Add CCPP to UFS-S2S-model
    DeniseWorthen authored Apr 2, 2020
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Commits on Apr 3, 2020

  1. update FV3

    DeniseWorthen committed Apr 3, 2020
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  4. update compsets

    DeniseWorthen committed Apr 3, 2020
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Commits on Apr 4, 2020

  1. update compsets for trying to use testsize and fixes

    for restart compsets using fhrot
    DeniseWorthen committed Apr 4, 2020
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  2. reverted to batch queues; all tests pass for nems; restart

    mediator file failes for cmeps in RT but passes if use nccmp -d
    DeniseWorthen committed Apr 4, 2020
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Commits on Apr 5, 2020

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Commits on Apr 6, 2020

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Commits on Apr 7, 2020

  1. update MOM6

    DeniseWorthen committed Apr 7, 2020
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Commits on Apr 8, 2020

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  2. update MOM6

    DeniseWorthen committed Apr 8, 2020
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  3. update MOM6

    DeniseWorthen committed Apr 8, 2020
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Commits on Apr 9, 2020

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Commits on Apr 10, 2020

  1. begin modifying ufs-s2s w/ optional ccpp to be default

    test but with either nems or cmeps
    DeniseWorthen committed Apr 10, 2020
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Commits on Apr 13, 2020

  1. updates for compsets

    DeniseWorthen committed Apr 13, 2020
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Commits on Apr 15, 2020

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Commits on Apr 16, 2020

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Commits on Apr 17, 2020

  1. update gitmodules to point to master at ESCOMP for

    CMEPS and dev/emc for MOM6; update FV3 to latest
    develop w/ changes for fieldnames
    DeniseWorthen committed Apr 17, 2020
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Commits on Apr 24, 2020

  1. update submodules

    DeniseWorthen committed Apr 24, 2020
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  2. add WW3 as component and associated parm files. Update

    FV3 for ccpp/physics tsfcl fix
    DeniseWorthen committed Apr 24, 2020
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  4. update FV3

    DeniseWorthen committed Apr 24, 2020
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Commits on Apr 27, 2020

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Commits on Apr 29, 2020

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  2. start building alt compset run version of cmeps/nems

    ccpp prod only
    DeniseWorthen committed Apr 29, 2020
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  5. modifications for cmeps

    DeniseWorthen committed Apr 29, 2020
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Commits on May 1, 2020

  1. Merge pull request #24 from ufs-community/develop

    Remove IPD tests and CCPP repro tests from the regression test system…
    DeniseWorthen authored May 1, 2020
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  3. updating compsets

    DeniseWorthen committed May 1, 2020
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Commits on May 4, 2020

  1. Merge pull request #25 from ufs-community/develop

    Feature/alt compsetrun (ufs-community#75)
    DeniseWorthen authored May 4, 2020
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Commits on May 6, 2020

  1. Merge pull request #26 from ufs-community/develop

    Porting regression tests to Orion (ufs-community#78)
    DeniseWorthen authored May 6, 2020
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Commits on May 7, 2020

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Commits on May 11, 2020

  1. Add CICE6 appbuilder and CICE6 submodule

    Update CMEPS to current ESCOMP master
    Update NEMS to feature/cice6 branch
    DeniseWorthen committed May 11, 2020
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Commits on May 12, 2020

  1. Merge pull request #27 from ufs-community/develop

    Update NEMS submodule
    DeniseWorthen authored May 12, 2020
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Commits on May 14, 2020

  1. changing compile.sh and updating before_components.mk, configure.fv3.…

    …hera.intel, and configure.fv3.wcoss_dell_p3
    SMoorthi-emc committed May 14, 2020
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  2. fixing missed logic in before_components.mk and adding fv3_debug modu…

    …lefiles in dell and hera
    SMoorthi-emc committed May 14, 2020
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  4. updating compile.sh

    SMoorthi-emc committed May 14, 2020
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Commits on May 19, 2020

  1. Merge pull request #31 from ufs-community/develop

    wave-ocean coupling (ufs-community#91)
    DeniseWorthen authored May 19, 2020
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Commits on May 27, 2020

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Commits on May 28, 2020

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Commits on Jun 1, 2020

  1. Merge pull request #34 from ufs-community/develop

    Orion post maintenance fix (ufs-community#102)
    DeniseWorthen authored Jun 1, 2020
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Commits on Jun 3, 2020

  1. Modify Moorthi's compile.sh

    * Change to fv3_coupled module in before_components
    * Add MOM6_MAKEOPT and CICE_MAKEOPT in compile.sh for debug
    * Change compile specifications in rt.conf
    * Change arguments to function call compile.sh in rt.sh and rt_utils.sh
    MinsukJi-NOAA committed Jun 3, 2020
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Commits on Jun 4, 2020

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  4. Add Orion RT results

    MinsukJi-NOAA committed Jun 4, 2020
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Commits on Jun 5, 2020

  1. Merge pull request #35 from ufs-community/develop

    Add CMEPS to ufs-s2s-model (ufs-community#90)
    DeniseWorthen authored Jun 5, 2020
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  6. add cice6 ice_in_template

    ice_in_template in this branch will not work for cice5
    anymore
    DeniseWorthen committed Jun 5, 2020
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  11. Revert "update FV3 for frac grid work"

    This reverts commit 63ab6a7.
    DeniseWorthen committed Jun 5, 2020
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Commits on Jun 9, 2020

  1. add ccpp cice6 cmeps appbuilder

    code builds on cheyenne using appbuilder; compile.sh
    fails
    DeniseWorthen committed Jun 9, 2020
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Commits on Jun 10, 2020

  1. update CICE6 submodule

    remove pnetcdf from fv3_coupled
    DeniseWorthen committed Jun 10, 2020
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Commits on Jun 11, 2020

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Commits on Jun 13, 2020

  1. Merge pull request #38 from ufs-community/develop

    Hera module changes related to contrib packages (ufs-community#110)
    DeniseWorthen authored Jun 13, 2020
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Commits on Jun 15, 2020

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  3. update CMEPS submodule

    DeniseWorthen committed Jun 15, 2020
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Commits on Jun 16, 2020

  1. Merge pull request #40 from ufs-community/develop

    Add optional tests (ufs-community#111)
    DeniseWorthen authored Jun 16, 2020
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Commits on Jun 17, 2020

  1. Enable rt.sh dependency relations

    *Used to create baselines in one step without manual copying of files
    *Used for restart rt to get initial data from work directory
    *Merge cpld_fv3_mom6_cice_atm_flux_restart_run.IN into cpld_fv3_mom6_cice_atm_flux_run.IN
    MinsukJi-NOAA committed Jun 17, 2020
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Commits on Jun 18, 2020

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  2. add Hera RT result logs

    MinsukJi-NOAA committed Jun 18, 2020
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Commits on Jun 19, 2020

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  3. Merge pull request #41 from MinsukJi-NOAA/feature/rt-dependency

    Feature/rt dependency
    DeniseWorthen authored Jun 19, 2020
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Commits on Jun 22, 2020

  1. update CICE6 submodule

    DeniseWorthen committed Jun 22, 2020
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Commits on Jun 25, 2020

  1. update NEMS submodule

    DeniseWorthen committed Jun 25, 2020
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  3. Merge pull request #42 from ufs-community/develop

    Enable rt.sh dependency relations (ufs-community#112)
    DeniseWorthen authored Jun 25, 2020
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Commits on Jun 26, 2020

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Commits on Jun 30, 2020

  1. update CMEPS, FV3

    DeniseWorthen committed Jun 30, 2020
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Commits on Jul 1, 2020

  1. update CMEPS submodule

    DeniseWorthen committed Jul 1, 2020
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Commits on Jul 2, 2020

  1. update CICE6 submodule

    add parm files and ice_in_template
    Contains hard-wired values!
    Need to set using variables w/in rt.sh
    DeniseWorthen committed Jul 2, 2020
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Commits on Jul 4, 2020

  1. update CMEPS submodule

    DeniseWorthen committed Jul 4, 2020
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Commits on Jul 5, 2020

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Commits on Jul 7, 2020

  1. update CICE6, CMEPS

    DeniseWorthen committed Jul 7, 2020
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Commits on Jul 8, 2020

  1. update NEMS for correct path to forapps/ufs in

    cice6 component make
    DeniseWorthen committed Jul 8, 2020
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Commits on Jul 10, 2020

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  2. update to CMEPS

    DeniseWorthen committed Jul 10, 2020
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  4. update NEMS

    DeniseWorthen committed Jul 10, 2020
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  5. update CICE5

    DeniseWorthen committed Jul 10, 2020
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Commits on Jul 13, 2020

  1. remove CICE5 and nems RT tests

    make all compile statements CICE6
    DeniseWorthen committed Jul 13, 2020
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  2. remove cached CICE_SRC

    DeniseWorthen committed Jul 13, 2020
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Commits on Jul 15, 2020

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  3. more files

    DeniseWorthen committed Jul 15, 2020
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Commits on Jul 16, 2020

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  2. feature/cice6-cmake (#43)

    * move submodules around
    
    Change-Id: Ibdb7216abe1e50df41fce0826f450cbdcfe101ef
    
    * cmake required changes
    
    Change-Id: I54ccc0dc678b195ea9a5d18dfad12e2ed3c179fe
    
    * forgot the NetCDF finder
    
    Change-Id: Ide433b5a16c180b7576e73f08484dfc01430399f
    
    * update the list of files in MOM6 following latest merge
    
    Change-Id: Ib7d5d5f6f3fbc18d026b8400de371a8001de69d8
    aerorahul authored Jul 16, 2020
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  4. remove nems.configure files used with NEMS mediator; add CPLMODE

    for setting coupling_mode using CMEPS mediator to either nems_orig
    or nems_frac
    DeniseWorthen committed Jul 16, 2020
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  7. more mods for cice6

    add frac_grid default to nml, fix compile for cice6, fix file
    name in one of the tests
    DeniseWorthen committed Jul 16, 2020
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  8. add wcoss_phase3 files

    DeniseWorthen committed Jul 16, 2020
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  13. changes to mom_input templates

    add MOM input template for waves at 1/2 deg
    add CHECKSUM=false setting to all mom templates
    DeniseWorthen committed Jul 16, 2020
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Commits on Jul 17, 2020

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Commits on Jul 21, 2020

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  2. cherry pick updates

    DeniseWorthen committed Jul 21, 2020
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  3. update CICE

    DeniseWorthen committed Jul 21, 2020
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  5. two fixes for 1/2 deg

    DeniseWorthen committed Jul 21, 2020
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Commits on Jul 23, 2020

  1. updates for mx050 tests

    DeniseWorthen committed Jul 23, 2020
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Commits on Jul 24, 2020

  1. update CICE

    DeniseWorthen committed Jul 24, 2020
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Commits on Jul 27, 2020

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  2. update FMS,FV3,stoch

    DeniseWorthen committed Jul 27, 2020
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  3. update NEMS

    DeniseWorthen committed Jul 27, 2020
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  5. update submodules

    DeniseWorthen committed Jul 27, 2020
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Commits on Aug 1, 2020

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Commits on Aug 2, 2020

  1. update mom6

    DeniseWorthen committed Aug 2, 2020
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  2. update MOM

    DeniseWorthen committed Aug 2, 2020
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  2. Revert "update cice for new develop branch"

    This reverts commit 901705d.
    DeniseWorthen committed Aug 3, 2020
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  3. use MOM6 dev/emc

    DeniseWorthen committed Aug 7, 2020
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  4. fix MOM6 branch

    DeniseWorthen committed Aug 7, 2020
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Commits on Aug 9, 2020

  1. move resolution dependent items to new branch

    new branch feature/rtres has been created to contain items
    used to run rts for new resolutions; removed from this branch
    in order to make cleaner commit to s2s
    DeniseWorthen committed Aug 9, 2020
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Commits on Aug 10, 2020

  1. update CICE submodule

    DeniseWorthen committed Aug 10, 2020
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Commits on Aug 12, 2020

  1. relocate restart_coszen

    DeniseWorthen committed Aug 12, 2020
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  2. update CICE

    DeniseWorthen committed Aug 12, 2020
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  3. update CICE submodule and move dbug flag settings

    in nems.configure
    DeniseWorthen committed Aug 12, 2020
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Commits on Aug 14, 2020

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  2. update to latest FV3

    DeniseWorthen committed Aug 14, 2020
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  3. update parm

    DeniseWorthen committed Aug 14, 2020
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  2. add git templates (#46)

    * Issue templates (ufs-community#165)
    
    * Update issue templates.
    
    * Add a pull request template form (ufs-community#166)
    
    Co-authored-by: arun chawla <[email protected]>
    Co-authored-by: BinLi-NOAA <[email protected]>
    3 people authored Aug 17, 2020
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  4. update CICE

    DeniseWorthen committed Aug 18, 2020
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Commits on Aug 19, 2020

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  3. update CICE

    DeniseWorthen committed Aug 19, 2020
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Commits on Aug 24, 2020

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Commits on Aug 25, 2020

  1. remove 050 template

    DeniseWorthen committed Aug 25, 2020
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  3. update FV3

    DeniseWorthen committed Aug 27, 2020
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  4. update NEMS

    DeniseWorthen committed Aug 27, 2020
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Commits on Aug 31, 2020

  1. update CICE

    DeniseWorthen committed Aug 31, 2020
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Commits on Sep 2, 2020

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Commits on Sep 3, 2020

  1. fix existing cold run sequence to give non-zero values for

    ocean at start of cold2
    DeniseWorthen committed Sep 3, 2020
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  5. update WW3 after merge of z0 fix over ice

    point to new baselines in rt.sh
    DeniseWorthen committed Sep 4, 2020
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Commits on Sep 5, 2020

  1. update to NEMS develop

    DeniseWorthen committed Sep 5, 2020
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  2. point to new baseline

    DeniseWorthen committed Sep 7, 2020
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Commits on Sep 8, 2020

  1. add dell-p3 logs

    DeniseWorthen committed Sep 8, 2020
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  2. add hera logs

    DeniseWorthen committed Sep 8, 2020
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  3. add orion logs

    DeniseWorthen committed Sep 8, 2020
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  5. update MOM6

    DeniseWorthen committed Sep 8, 2020
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  8. add orion logs

    DeniseWorthen committed Sep 8, 2020
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  9. add hera logs

    DeniseWorthen committed Sep 8, 2020
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Commits on Sep 9, 2020

  1. add dell-p3 logs

    DeniseWorthen committed Sep 9, 2020
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  2. update MOM6 submodule

    DeniseWorthen committed Sep 9, 2020
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