Use hpc-stack libraries in ufs-s2s-model (#191)

ufs-community · Sep 22, 2020 · 94a4cc6 · 94a4cc6
1 parent dacb820
commit 94a4cc6
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Showing 16 changed files with 17,186 additions and 15,753 deletions.
diff --git a/conf/configure.fv3.hera.intel b/conf/configure.fv3.hera.intel
@@ -181,5 +181,5 @@ LDFLAGS += $(LIBS)
 ifdef InNemsMakefile
 FFLAGS += $(ESMF_INC)
 CPPFLAGS += -traditional
-EXTLIBS = $(NCEPLIBS) $(ESMF_LIB) $(LDFLAGS) $(NETCDF_LIB)
+EXTLIBS = $(NCEPLIBS) $(ESMF_F90LINKPATHS) $(ESMF_LIB) $(LDFLAGS) $(NETCDF_LIB)
 endif
diff --git a/conf/configure.fv3.orion.intel b/conf/configure.fv3.orion.intel
@@ -39,7 +39,7 @@ include       $(ESMFMKFILE)
 ESMF_INC    = $(ESMF_F90COMPILEPATHS)
 
 NEMSIOINC = -I$(NEMSIO_INC)
-NCEPLIBS = $(POST_LIB) $(NEMSIO_LIB) $(G2_LIB4) $(G2TMPL_LIB) $(BACIO_LIB4) $(SP_LIBd) $(W3EMC_LIBd) $(W3NCO_LIBd) $(CRTM_LIB) $(JASPER_LIB) -lpng -lz
+NCEPLIBS = $(POST_LIB) $(NEMSIO_LIB) $(G2_LIB4) $(G2TMPL_LIB) $(BACIO_LIB4) $(SP_LIBd) $(W3EMC_LIBd) $(W3NCO_LIBd) $(CRTM_LIB) $(JASPER_ROOT)/lib64/libjasper.a -lpng -lz
 
 ##############################################
 # Need to use at least GNU Make version 3.81 #
@@ -184,5 +184,5 @@ LDFLAGS += $(LIBS)
 ifdef InNemsMakefile
 FFLAGS += $(ESMF_INC)
 CPPFLAGS += -traditional
-EXTLIBS = $(NCEPLIBS) $(ESMF_LIB) $(LDFLAGS) $(NETCDF_LIB)
+EXTLIBS = $(NCEPLIBS) $(ESMF_F90LINKPATHS) $(ESMF_LIB) $(LDFLAGS) $(NETCDF_LIB)
 endif
diff --git a/conf/configure.fv3.wcoss_dell_p3 b/conf/configure.fv3.wcoss_dell_p3
@@ -28,7 +28,7 @@ include       $(ESMFMKFILE)
 ESMF_INC    = $(ESMF_F90COMPILEPATHS)
 
 NEMSIOINC = -I$(NEMSIO_INC)
-NCEPLIBS = $(POST_LIB) $(NEMSIO_LIB) $(G2_LIB4) $(G2TMPL_LIB) $(BACIO_LIB4) $(SP_LIBd) $(W3EMC_LIBd) $(W3NCO_LIBd) $(CRTM_LIB) $(JASPER_LIB) -lpng -lz
+NCEPLIBS = $(POST_LIB) $(NEMSIO_LIB) $(G2_LIB4) $(G2TMPL_LIB) $(BACIO_LIB4) $(SP_LIBd) $(W3EMC_LIBd) $(W3NCO_LIBd) $(CRTM_LIB) $(JASPER_ROOT)/lib64/libjasper.a -lpng -lz
 
 ##############################################
 # Need to use at least GNU Make version 3.81 #
@@ -168,5 +168,5 @@ LDFLAGS += $(LIBS)
 ifdef InNemsMakefile
 FFLAGS += $(ESMF_INC)
 CPPFLAGS += -traditional
-EXTLIBS = $(NCEPLIBS) $(ESMF_LIB) $(LDFLAGS)
+EXTLIBS = $(NCEPLIBS) $(ESMF_F90LINKPATHS) $(ESMF_LIB) $(LDFLAGS)
 endif
diff --git a/modulefiles/hera.intel/fv3 b/modulefiles/hera.intel/fv3
@@ -1,60 +1,41 @@
-#%Module######################################################################
-##
-##    NEMS FV3 Prerequisites: Hera/Intel
+#%Module
 
 proc ModulesHelp {} {
-  puts stderr "\tcit - loads modules required for building and running FV3 under NEMS on Hera/Intel"
+  puts stderr "\tcit - loads modules required for building and running UFS Model on Hera/Intel"
 }
 
-module-whatis "loads NEMS FV3 prerequisites for Hera/Intel"
+module-whatis "loads UFS Model prerequisites for Hera/Intel"
 
-##
-## load contrib environment
-## load slurm utils (arbitrary.pl  layout.pl)
-##
-module use -a /contrib/sutils/modulefiles
+module use /contrib/sutils/modulefiles
 module load sutils
 
-##
-## load programming environment
-## this typically includes compiler, MPI and job scheduler
-##
-module load intel/18.0.5.274
-module load impi/2018.0.4
-
-##
-## NCEP libraries
-##
-module use -a /scratch2/NCEPDEV/nwprod/NCEPLIBS/cmake/install/NCEPLIBS/modules
-module load bacio/2.4.0
-module load crtm_dev/2.3.0
-module load g2/3.4.0
-module load g2tmpl/1.9.0
-module load ip/3.3.0
-module load nceppost/dceca26
-module load nemsio/2.5.1
-module load sp/2.3.0
-module load w3emc/2.7.0
-module load w3nco/2.4.0
-
-module load gfsio/1.4.0
-module load sfcio/1.4.0
-module load sigio/2.3.0
-
-##
-## load ESMF library for above compiler / MPI combination
-## use pre-compiled EMSF library for above compiler / MPI combination
-##
-module use -a /scratch1/NCEPDEV/nems/emc.nemspara/soft/modulefiles
-module load netcdf_parallel/4.7.4.release
-module load esmf/8.1.0bs27
-module load hdf5_parallel/1.10.6.release
-
-##
-## load cmake
-##
 module load cmake/3.16.1
 setenv CMAKE_C_COMPILER mpiicc
 setenv CMAKE_CXX_COMPILER mpiicpc
 setenv CMAKE_Fortran_COMPILER mpiifort
 setenv CMAKE_Platform hera.intel
+
+module use /scratch2/NCEPDEV/nwprod/hpc-stack/libs/hpc-stack/v1.0.0-beta1/modulefiles/stack
+
+module load hpc/1.0.0-beta1
+module load hpc-intel/18.0.5.274
+module load hpc-impi/2018.0.4
+
+module load jasper/2.0.15
+module load zlib/1.2.11
+module load png/1.6.35
+
+module load hdf5/1.10.6
+module load netcdf/4.7.4
+module load esmf/8_1_0_beta_snapshot_27
+
+module load bacio/2.4.1
+module load crtm/2.3.0
+module load g2/3.4.1
+module load g2tmpl/1.9.1
+module load ip/3.3.3
+module load nceppost/dceca26
+module load nemsio/2.5.2
+module load sp/2.3.3
+module load w3emc/2.7.3
+module load w3nco/2.4.1
diff --git a/modulefiles/hera.intel/fv3_debug b/modulefiles/hera.intel/fv3_debug
@@ -1,60 +1,41 @@
-#%Module######################################################################
-##
-##    NEMS FV3 Prerequisites: Hera/Intel
+#%Module
 
 proc ModulesHelp {} {
-  puts stderr "\tcit - loads modules required for building and running FV3 under NEMS on Hera/Intel"
+  puts stderr "\tcit - loads modules required for building and running UFS Model on Hera/Intel"
 }
 
-module-whatis "loads NEMS FV3 prerequisites for Hera/Intel"
+module-whatis "loads UFS Model prerequisites for Hera/Intel"
 
-##
-## load contrib environment
-## load slurm utils (arbitrary.pl  layout.pl)
-##
-module use -a /contrib/sutils/modulefiles
+module use /contrib/sutils/modulefiles
 module load sutils
 
-##
-## load programming environment
-## this typically includes compiler, MPI and job scheduler
-##
-module load intel/18.0.5.274
-module load impi/2018.0.4
-
-##
-## NCEP libraries
-##
-module use -a /scratch2/NCEPDEV/nwprod/NCEPLIBS/cmake/install/NCEPLIBS/modules
-module load bacio/2.4.0
-module load crtm_dev/2.3.0
-module load g2/3.4.0
-module load g2tmpl/1.9.0
-module load ip/3.3.0
-module load nceppost/dceca26
-module load nemsio/2.5.1
-module load sp/2.3.0
-module load w3emc/2.7.0
-module load w3nco/2.4.0
-
-module load gfsio/1.4.0
-module load sfcio/1.4.0
-module load sigio/2.3.0
-
-##
-## load ESMF library for above compiler / MPI combination
-## use pre-compiled EMSF library for above compiler / MPI combination
-##
-module use -a /scratch1/NCEPDEV/nems/emc.nemspara/soft/modulefiles
-module load netcdf_parallel/4.7.4.release
-module load esmf/8.1.0bs27g
-module load hdf5_parallel/1.10.6.release
-
-##
-## load cmake
-##
 module load cmake/3.16.1
 setenv CMAKE_C_COMPILER mpiicc
 setenv CMAKE_CXX_COMPILER mpiicpc
 setenv CMAKE_Fortran_COMPILER mpiifort
 setenv CMAKE_Platform hera.intel
+
+module use /scratch2/NCEPDEV/nwprod/hpc-stack/libs/hpc-stack/v1.0.0-beta1/modulefiles/stack
+
+module load hpc/1.0.0-beta1
+module load hpc-intel/18.0.5.274
+module load hpc-impi/2018.0.4
+
+module load jasper/2.0.15
+module load zlib/1.2.11
+module load png/1.6.35
+
+module load hdf5/1.10.6
+module load netcdf/4.7.4
+module load esmf/8_1_0_beta_snapshot_27-debug
+
+module load bacio/2.4.1
+module load crtm/2.3.0
+module load g2/3.4.1
+module load g2tmpl/1.9.1
+module load ip/3.3.3
+module load nceppost/dceca26
+module load nemsio/2.5.2
+module load sp/2.3.3
+module load w3emc/2.7.3
+module load w3nco/2.4.1
diff --git a/modulefiles/orion.intel/fv3 b/modulefiles/orion.intel/fv3
@@ -1,67 +1,40 @@
-#%Module######################################################################
-##
-##    NEMS FV3 Prerequisites: Orion/Intel
+#%Module
 
 proc ModulesHelp {} {
-  puts stderr "\tcit - loads modules required for building and running FV3 under NEMS on Orion/Intel"
+  puts stderr "\tcit - loads modules required for building and running UFS Model on Orion/Intel"
 }
 
-module-whatis "loads NEMS FV3 prerequisites for Orion/Intel"
+module-whatis "loads UFS Model prerequisites for Orion/Intel"
 
-##
-## load contrib environment
-## load noaatools (slurm utils (arbitrary.pl  layout.pl))
-##
 module load contrib noaatools
 
-##
-## load programming environment
-## this typically includes compiler, MPI and job scheduler
-##
-module load intel/2018
-module load impi/2018
-
-##
-## NCEP libraries
-##
-module use -a /apps/contrib/NCEPLIBS/orion/cmake/install/NCEPLIBS/modules
-module load bacio/2.4.0
-module load crtm_dev/2.3.0
-module load g2/3.4.0
-module load g2tmpl/1.9.0
-module load ip/3.3.0
-module load nceppost/dceca26
-module load nemsio/2.5.1
-module load sp/2.3.0
-module load w3emc/2.7.0
-module load w3nco/2.4.0
+module load cmake/3.17.3
+setenv CMAKE_C_COMPILER mpiicc
+setenv CMAKE_CXX_COMPILER mpiicpc
+setenv CMAKE_Fortran_COMPILER mpiifort
+setenv CMAKE_Platform orion.intel
 
-module load gfsio/1.4.0
-module load sfcio/1.4.0
-module load sigio/2.3.0
+module use /apps/contrib/NCEP/libs/hpc-stack/v1.0.0-beta1/modulefiles/stack
 
-module use /apps/contrib/NCEPLIBS/orion/modulefiles
-module load jasper/1.900.2
-module load png/1.2.44
-module load z/1.2.6
+module load hpc/1.0.0-beta1
+module load hpc-intel/2018.4
+module load hpc-impi/2018.4
 
-##
-## load ESMF library for above compiler / MPI combination
-## use pre-compiled EMSF library for above compiler / MPI combination
-##
-module use /apps/contrib/NCEPLIBS/lib/modulefiles
-module load netcdfp/4.7.4.release
-module load esmflocal/8.1.0.27bs.release
+module load jasper/2.0.15
+module load zlib/1.2.11
+module load png/1.6.35
 
-###
-### load Python 3
-#module load python/3.7.5
+module load hdf5/1.10.6
+module load netcdf/4.7.4
+module load esmf/8_1_0_beta_snapshot_27
 
-##
-## load cmake
-##
-module load cmake/3.15.4
-setenv CMAKE_C_COMPILER mpiicc
-setenv CMAKE_CXX_COMPILER mpiicpc
-setenv CMAKE_Fortran_COMPILER mpiifort
-setenv CMAKE_Platform orion.intel
+module load bacio/2.4.1
+module load crtm/2.3.0
+module load g2/3.4.1
+module load g2tmpl/1.9.1
+module load ip/3.3.3
+module load nceppost/dceca26
+module load nemsio/2.5.2
+module load sp/2.3.3
+module load w3emc/2.7.3
+module load w3nco/2.4.1