updates version for phastcons and phylop

uab-cgds-worthey · Apr 7, 2024 · 6ef7c23 · 6ef7c23
1 parent 998aaff
commit 6ef7c23
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Showing 2 changed files with 8 additions and 8 deletions.
diff --git a/configs/col_config.yaml b/configs/col_config.yaml
@@ -82,10 +82,10 @@ raw_cols:
  - pangalodb.specificity
  - phdsnpg.score
  - phastcons.phastcons100_vert
- - phastcons.phastcons30_mamm
+ - phastcons.phastcons470_mamm
  - phastcons.phastcons17way_primate
  - phylop.phylop100_vert
- - phylop.phylop30_mamm
+ - phylop.phylop470_mamm
  - phylop.phylop17_primate
  - polyphen2.hdiv_rank
  - polyphen2.hvar_rank
@@ -270,10 +270,10 @@ median_scores:
  pangalodb.specificity: 0.0112782
  phdsnpg.score: 0.93
  phastcons.phastcons100_vert: 1.0
- phastcons.phastcons30_mamm: 0.987
+ phastcons.phastcons470_mamm: 0.987
  phastcons.phastcons17way_primate: 0.961
  phylop.phylop100_vert: 4.239
- phylop.phylop30_mamm: 1.026
+ phylop.phylop470_mamm: 1.026
  phylop.phylop17_primate: 0.599
  polyphen2.hdiv_rank: 0.55554
  polyphen2.hvar_rank: 0.53365
@@ -409,10 +409,10 @@ filtered_cols:
  - pangalodb.specificity
  - phdsnpg.score
  - phastcons.phastcons100_vert
- - phastcons.phastcons30_mamm
+ - phastcons.phastcons470_mamm
  - phastcons.phastcons17way_primate
  - phylop.phylop100_vert
- - phylop.phylop30_mamm
+ - phylop.phylop470_mamm
  - phylop.phylop17_primate
  - polyphen2.hdiv_rank
  - polyphen2.hvar_rank

diff --git a/configs/opencravat_test_config.json b/configs/opencravat_test_config.json
@@ -438,7 +438,7 @@
     }
   },
   {
-    "col_id": "phastcons.phastcons30_mamm",
+    "col_id": "phastcons.phastcons470_mamm",
     "parse_type": {
       "none": "none"
     }
@@ -456,7 +456,7 @@
     }
   },
   {
-    "col_id": "phylop.phylop30_mamm",
+    "col_id": "phylop.phylop470_mamm",
     "parse_type": {
       "none": "none"
     }