put possibly failing grep inside if expression #7
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| # documentation: https://help.github.com/en/articles/workflow-syntax-for-github-actions | |
| name: Analysis of a pull request | |
| on: [push, pull_request, workflow_dispatch] | |
| permissions: | |
| contents: read # to fetch code (actions/checkout) | |
| jobs: | |
| pilot: | |
| runs-on: ubuntu-20.04 | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| EESSI_VERSION: | |
| - 2023.06 | |
| EESSI_SOFTWARE_SUBDIR: | |
| - x86_64/generic | |
| # - aarch64/generic | |
| # - x86_64/amd/zen2 | |
| # - x86_64/intel/broadwell | |
| # - x86_64/intel/cascadelake | |
| # - x86_64/intel/skylake_avx512 | |
| EASYSTACK_FILE: | |
| # - eessi-2023.06-eb-4.7.2-2021a.yml | |
| # - eessi-2023.06-eb-4.7.2-2021b.yml | |
| # - eessi-2023.06-eb-4.7.2-2022a.yml | |
| # - eessi-2023.06-eb-4.7.2-2022b.yml | |
| # - eessi-2023.06-eb-4.7.2-system.yml | |
| # - eessi-2023.06-eb-4.8.0-system.yml | |
| - eessi-2023.06-eb-4.8.1-2022a.yml | |
| # - eessi-2023.06-eb-4.8.1-system.yml | |
| python: [3.7] # ScanCode-Toolkit requires Python 3.7 or newer | |
| steps: | |
| - name: Install dependencies for ScanCode-Toolkit | |
| run: | | |
| sudo apt install python-dev bzip2 xz-utils zlib1g libxml2-dev libxslt1-dev libpopt0 | |
| - name: set up Python | |
| uses: actions/setup-python@13ae5bb136fac2878aff31522b9efb785519f984 # v4.3.0 | |
| with: | |
| python-version: ${{matrix.python}} | |
| architecture: x64 | |
| - name: upgrade base tools | |
| run: | | |
| pip install --user --upgrade pip setuptools wheel | |
| - name: Install ScanCode-Toolkit | |
| run: | | |
| pip install --user scancode-toolkit | |
| - name: Check out software-layer repository | |
| uses: actions/checkout@93ea575cb5d8a053eaa0ac8fa3b40d7e05a33cc8 # v3.1.0 | |
| - name: Mount EESSI CernVM-FS pilot repository | |
| uses: cvmfs-contrib/github-action-cvmfs@d4641d0d591c9a5c3be23835ced2fb648b44c04b # v3.1 | |
| with: | |
| cvmfs_config_package: https://github.com/NorESSI/filesystem-layer/releases/download/latest/cvmfs-config-nessi_latest_all.deb | |
| cvmfs_http_proxy: DIRECT | |
| cvmfs_repositories: pilot.nessi.no | |
| - name: Determine missing installations | |
| if: '!cancelled()' | |
| run: | | |
| export EESSI_SOFTWARE_SUBDIR_OVERRIDE=${{matrix.EESSI_SOFTWARE_SUBDIR}} | |
| source /cvmfs/pilot.nessi.no/versions/${{matrix.EESSI_VERSION}}/init/bash | |
| module load EasyBuild | |
| eb --version | |
| export EESSI_PREFIX=/cvmfs/pilot.nessi.no/versions/${{matrix.EESSI_VERSION}} | |
| export EESSI_OS_TYPE=linux | |
| env | grep ^EESSI | sort | |
| source configure_easybuild | |
| EB_MISSING_OUT=eb_missing.out | |
| echo "eb start" | |
| eb --missing --easystack ${{matrix.EASYSTACK_FILE}} > ${EB_MISSING_OUT} || true | |
| echo "eb done" | |
| echo "grep start" | |
| if [[ $(grep '.* out of .* required modules missing:' ${EB_MISSING_OUT}) ]]; then | |
| # there may be multiple sections with the above search string | |
| # we grab all lines listing missing modules and print a list of | |
| # unique modules only | |
| MISSING_MODULES=$(grep '^* ' ${EB_MISSING_OUT} | sort -u) | |
| echo "found $(echo ${MISSING_MODULES} | wc -l) modules missing:" | |
| echo "${MISSING_MODULES}" | |
| else | |
| echo "no modules missing" | |
| fi | |
| - name: Update PR description | |
| uses: nefrob/pr-description@eb00e54af678cf0d50a5b8fdd54b557c9cd8ddc5 | |
| with: | |
| content: "Hello there!" | |
| regex: "matchuntilthenend.*" | |
| regexFlags: i | |
| token: ${{ secrets.GITHUB_TOKEN }} |