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Update to use catalog.#2

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SilasK wants to merge 9 commits intotrickovicmatija:maintrickovicmatija/use_catalog:mainfrom SilasK:mainSilasK/use_subspecies_catalog:mainCopy head branch name to clipboard

+186-251

Commits

Commits on Jan 30, 2024

• no trim use functions

  SilasK

  committed
  4776916

• update from server

  SilasK

  committed
  0d63acb

• format

  SilasK

  committed
  dd110a7

• new config pep files

  SilasK

  committed
  9e39f86

• ad merge gather script

  SilasK

  committed
  f070d33

• better memory

  SilasK

  committed
  c14ceb3

• need qc file in sample table

  SilasK

  committed
  3eb4fcf

• readme update

  SilasK

  committed
  8685734

Commits on Jul 5, 2024

• adapted on server times

  SilasK

  committed
  d35a771