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Scheduled

Scheduled #156

# Run all unit tests and integration tests for all Python versions
# and platforms at 3am UTC every day and on PRs to the main branch
name: Scheduled
on:
workflow_dispatch:
pull_request:
branches:
- main
# Run everyday at 3 am UTC
schedule:
- cron: "0 3 * * *"
jobs:
pre_job:
runs-on: ubuntu-latest
# Map a step output to a job output
outputs:
should_skip: ${{ steps.skip_check.outputs.should_skip }}
steps:
- id: skip_check
uses: fkirc/skip-duplicate-actions@master
with:
# All of these options are optional, so you can remove them if you are happy with the defaults
concurrent_skipping: "never"
cancel_others: "true"
paths_ignore: '["**/README.md"]'
style:
needs: pre_job
if: ${{ needs.pre_job.outputs.should_skip != 'true' }}
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v3
- name: Setup python
uses: actions/setup-python@v4
with:
python-version: 3.11
- name: Check style
run: |
python -m pip install pre-commit
pre-commit run ruff
build:
needs: style
runs-on: ${{ matrix.os }}
strategy:
fail-fast: false
matrix:
os: [ubuntu-latest, macos-latest, windows-latest]
python-version: ["3.8", "3.9", "3.10", "3.11"]
steps:
- uses: actions/checkout@v3
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python-version }}
- name: Install Linux system dependencies
if: matrix.os == 'ubuntu-latest'
run: |
sudo apt-get update
sudo apt install gfortran gcc libopenblas-dev graphviz pandoc
sudo apt install texlive-full
# Added fixes to homebrew installs:
# rm -f /usr/local/bin/2to3
# (see https://github.com/actions/virtual-environments/issues/2322)
- name: Install MacOS system dependencies
if: matrix.os == 'macos-latest'
run: |
rm -f /usr/local/bin/2to3*
rm -f /usr/local/bin/idle3*
rm -f /usr/local/bin/pydoc3*
rm -f /usr/local/bin/python3*
brew update
brew install graphviz
brew install openblas
- name: Install Windows system dependencies
if: matrix.os == 'windows-latest'
run: choco install graphviz --version=2.38.0.20190211
- name: Install standard python dependencies
run: |
python -m pip install --upgrade pip wheel setuptools nox
- name: Install SuiteSparse and SUNDIALS on GNU/Linux
if: matrix.os == 'ubuntu-latest'
run: nox -s pybamm-requires
- name: Run unit tests for GNU/Linux with Python 3.8, 3.9, and 3.10, and for macOS and Windows with all Python versions
if: (matrix.os == 'ubuntu-latest' && matrix.python-version != 3.11) || (matrix.os != 'ubuntu-latest')
run: nox -s unit
- name: Run unit tests for GNU/Linux with Python 3.11 and generate coverage report
if: matrix.os == 'ubuntu-latest' && matrix.python-version == 3.11
run: nox -s coverage
- name: Upload coverage report
if: matrix.os == 'ubuntu-latest' && matrix.python-version == 3.11
uses: codecov/[email protected]
- name: Run integration tests
run: nox -s integration
- name: Install docs dependencies and run doctests
if: matrix.os == 'ubuntu-latest'
run: nox -s doctests
- name: Install dev dependencies and run example tests
if: matrix.os == 'ubuntu-latest'
run: nox -s examples
#M-series Mac Mini
build-apple-mseries:
needs: style
runs-on: [self-hosted, macOS, ARM64]
env:
GITHUB_PATH: ${PYENV_ROOT/bin:$PATH}
strategy:
fail-fast: false
matrix:
python-version: ["3.8", "3.9", "3.10", "3.11"]
steps:
- uses: actions/checkout@v3
- name: Install python & create virtualenv
shell: bash
run: |
eval "$(pyenv init -)"
pyenv install ${{ matrix.python-version }} -s
pyenv virtualenv ${{ matrix.python-version }} pybamm-${{ matrix.python-version }}
- name: Install dependencies & run unit tests for Windows and MacOS
shell: bash
run: |
eval "$(pyenv init -)"
pyenv activate pybamm-${{ matrix.python-version }}
python -m pip install --upgrade pip wheel setuptools nox
python -m nox -s unit
- name: Run integration tests for Windows and MacOS
run: |
eval "$(pyenv init -)"
pyenv activate pybamm-${{ matrix.python-version }}
python -m nox -s integration
- name: Uninstall pyenv-virtualenv & python
if: always()
shell: bash
run: |
eval "$(pyenv init -)"
pyenv activate pybamm-${{ matrix.python-version }}
pyenv uninstall -f $( python --version )