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Remove the genes and colors input files #212

Merged
merged 2 commits into from
Oct 11, 2023
Merged

Remove the genes and colors input files #212

merged 2 commits into from
Oct 11, 2023

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sage-wright
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Closes #211

🛠️ Changes Being Made

Due to failures, the genes and colors optional input files have been removed.

🧠 Context and Rationale

These changes will prevent workflow failure.

📋 Workflow/Task Steps

Inputs

Outputs

🧪 Testing

Locally

Terra

🔬 Quality checks

Pull Request (PR) checklist:

  • Include a description of what is in this pull request in this message.
  • The workflow/task has been tested locally and on Terra
  • The CI/CD has been adjusted and tests are passing
  • Everything follows the style guide

@kapsakcj
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Augur_PHB workflow ran successfully for a few SC2 genomes & I could visualize the JSON in auspice without issue: https://app.terra.bio/#workspaces/theiagen-validations/curtis-sandbox-theiagen-validations/job_history/cb9235e0-ca4a-4168-bdef-57534fb94a1e

@kapsakcj kapsakcj merged commit 7fdcf2b into main Oct 11, 2023
5 checks passed
@cimendes cimendes deleted the smw-fix-augur-dev branch October 13, 2023 15:17
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Successfully merging this pull request may close these issues.

Errors with optional Augur_PHB inputs
3 participants